Although most immunologists do not routinely combine experiments with theoretical and mathematical modeling, new insights can be gained from this interdisciplinary approach. But what makes a good theoretical model?
References
Watson, J. & Crick, F. Nature 171, 737 (1953).
Burnet, F.M. The Clonal Selection Theory of Acquired Immunity (Vanderbilt Univ. Press, Nashville, 1959).
Billingham, R.E., Brent, L. & Medawar, P.B. Nature 172, 603–606 (1953).
Bretscher, P. & Cohn, M. Science 169, 1042 (1970).
Afferty, K.J. & Cunningham, A. Aust. J. Exp. Biol. Med. Sci. 53, 27–42 (1975).
Perelson, A.S. Nat. Rev. Immunol. 2, 28–36 (2002).
Vallitutti, S., Muller, S., Cella, M., Padovan, E. & Lanzavecchia, A. Nature 375, 148–151 (1995).
McKeithan, K. Proc. Natl. Acad. Sci. USA 92, 5042–5046 (1995).
Monks, C.R., Freiberg, B.A., Kupfer, H., Sciaky, N. & Kupfer, A. Nature 395, 82–86 (1998).
Grakoui, A. et al. Science 285, 221–227 (1999).
Ritchie, L.I. et al. Immunity 16, 595–606 (2002).
Lee, K.H. et al. Science 295, 1539–1542 (2002).
Hailman, E., Burack, W.R., Shaw, A.S., Dustin, M.L. & Allen, P.M. Immunity 16, 839–848 (2002).
Irvine, D.J., Purbhoo, M.A., Krogsgaard, M. & Davis, M.M. Nature 419, 845–849 (2002).
Coombs, D., Kalergis, A.M., Nathenson, S.G., Wofsy, C. & Goldstein, B. Nat. Immunol. 3, 926–931 (2002).
Qi, S.Y., Groves, J.T. & Chakraborty, A.K. Proc. Natl. Acad. Sci. USA 98, 6548–6553 (2001).
Lee, K. et al. Science, published online 25 September 2003 (doi:10.1126/Science.1086507).
Hoffmann, A., Levchenko, A., Scott, M.L. & Baltimore, D. Science 298, 1241–1245 (2002).
Miller, M.J., Wei, S.H., Cahalan, M.D. & Parker, I. Proc. Natl. Acad. Sci. USA 100, 2604–2609 (2003).
del Pozo, M.A. et al. Eur. J. Immunol. 29, 3609–3620 (1999).
Wedlich-Sodner, A. et al. Science 299, 1231–1235 (2003).
Stoll, S., Delon, J., Brotz, T.M. & Germain, R.N. Science 296, 1873–1876 (2002).
Bousso, P., Bhakta, N.R., Lewis, R.S. & Robey, E. Science 296, 1876–1880 (2002).
Acknowledgements
We thank T.A. Springer and D. Leja for images in Figure 1, and M.M. Davis, S.Y. Qi, A.R. Dinner, R.N. Germain, S. Raychaudhuri, Y. Hori, J.T. Groves and S.J. Lee for discussions on the involvement of modeling in cellular immunology. Supported by the National Institutes of Health.
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Chakraborty, A., Dustin, M. & Shaw, A. In silico models for cellular and molecular immunology: successes, promises and challenges. Nat Immunol 4, 933–936 (2003). https://doi.org/10.1038/ni1003-933
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DOI: https://doi.org/10.1038/ni1003-933
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