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Genome sequencing in clinical microbiology

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High-throughput sequencing is being adopted to characterize microbial pathogens and track their evolution and spread.

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Figure 1: Clinical microbiological laboratory workflow, now and in the future.

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Author notes

  1. Jacqueline Z-M Chan, Mark J Pallen, Beryl Oppenheim and Chrystala Constantinidou: All authors are at the Institute of Microbiology and Infection, University of Birmingham, UK.

Authors and Affiliations

  1. Mark J. Pallen, Beryl Oppenheim and Chrystala Constantinidou are also at the NIHR Surgical Reconstruction and Microbiology Research Centre, Queen Elizabeth Hospital, Birmingham, UK.,

    Mark J Pallen, Beryl Oppenheim & Chrystala Constantinidou

Authors
  1. Jacqueline Z-M Chan
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  2. Mark J Pallen
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  3. Beryl Oppenheim
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  4. Chrystala Constantinidou
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Corresponding author

Correspondence to Mark J Pallen.

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Competing interests

M.J.P. was a winner of an Ion Torrent Personal Genome Machine in the European PGM grant program.

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Chan, JM., Pallen, M., Oppenheim, B. et al. Genome sequencing in clinical microbiology. Nat Biotechnol 30, 1068–1071 (2012). https://doi.org/10.1038/nbt.2410

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