The modENCODE project uses integrative analysis to annotate genomic elements in the fruitfly and a nematode worm. The first fly data have now been published. See Articles p.473 & p.480 & Letter p.527
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Furlong, E. A fly in the face of genomics. Nature 471, 458–459 (2011). https://doi.org/10.1038/471458a
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DOI: https://doi.org/10.1038/471458a
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