Skip to main content
Log in

Structural plasticity broadens the specificity of an engineered protease

  • Article
  • Published:

From Nature

View current issue Submit your manuscript

Abstract

The substrate specificity of α-lytic protease has been changed dramatically, with a concomitant increase in activity, by replacing an active-site Met with Ala. The substrate specificity of both this mutant and another similar mutant are extraordinarily broad. X-ray crystallographic analysis shows that structural plasticity, a combination of alternate side-chain conformations and binding-site flexibility, allows both large and small substrates to be well accommodated.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Fersht, A. R. Enzyme Structure and Mechanism (Freeman, San Francisco, 1985).

    Google Scholar 

  2. Wells, J. A. Cunningham, B. C., Graycar, T. P. & Estell, D. A. Proc. natn. Acad. Sci. U.S.A. 84, 5167 (1987).

    Article  ADS  CAS  Google Scholar 

  3. Estell, D. A. et al. Science 233, 659 (1986).

    Article  ADS  CAS  Google Scholar 

  4. Wilks, H. M. et al. Science 242, 1541–1544 (1988).

    Article  ADS  CAS  Google Scholar 

  5. Craik, C. S. et al. Science 228, 291–297 (1985).

    Article  ADS  CAS  Google Scholar 

  6. Cronin, C. N. & Kirsch, J. F. Biochemistry 27, 4572 (1988).

    Article  CAS  Google Scholar 

  7. Fujinaga, M., Delbaere, L. T. J., Brayer, G. D. & James, M. N. G. J. molec. Biol. 183, 479 (1985).

    Article  Google Scholar 

  8. Brayer, G. D., Delbaere, L. T. J. & James, M. N. G. J. molec. Biol. 131, 743 (1979).

    Article  CAS  Google Scholar 

  9. Hunkapiller, M. W., Forgac, M. D. & Richards, J. H. Biochemistry 15, 5581 (1976).

    Article  CAS  Google Scholar 

  10. Bachovchin, W. W., Kaiser, R., Richards, J. H. & Roberts, J. D. Proc. natn. Acad. Sci. U.S.A. 78, 7323 (1981).

    Article  ADS  CAS  Google Scholar 

  11. Robillard, G. & Schulman, R. G. J. molec. Biol. 86, 541 (1974).

    Article  CAS  Google Scholar 

  12. Bone, R., Shenvi, A. B., Kettner, C. A. & Agard, D. A. Biochemistry 27, 7609 (1987).

    Article  Google Scholar 

  13. Schecter, I. & Berger, A. Biochem. Biophys. Res. Commun. 27, 157 (1967).

    Article  Google Scholar 

  14. Bone, R., Frank, D., Kettner, C. A. & Agard, D. A. Biochemistry (in the press).

  15. Bauer, C.-A., Brayer, G. D., Sielecki, A. R. & James, M. N. G. Eur. J. Biochem. 120, 289–294 (1981).

    Article  CAS  Google Scholar 

  16. Kettner, C. A., Bone, R., Agard, D. A. & Bachovchin, W. W. Biochemistry 27, 7682–7688 (1988).

    Article  CAS  Google Scholar 

  17. Dorovska, V. M., Variolomegev, S. D., Kazanskaya, N. F., Klyosov, A. A. & Martinek, K. FEBS Lett. 23, 122 (1972).

    Article  CAS  Google Scholar 

  18. Harper, W. J., Cook, R. R., Roberts, C. J., McLaughlin, B. J. & Powers, J. C. Biochemistry 23, 2995 (1984).

    Article  CAS  Google Scholar 

  19. Nakajima, K., Powers, J. C., Ashe, B. M. & Zimmerman, M. J. Biol. Chem. 254, 4027 (1979).

    CAS  PubMed  Google Scholar 

  20. Connolly, M. L. J. Appl. Crystallogr. 16, 548 (1983).

    Article  CAS  Google Scholar 

  21. Connolly, M. L. Science 221, 709 (1983).

    Article  ADS  CAS  Google Scholar 

  22. Silen, J. L., Frank, D., Fujishige, A., Bone, R. & Agard, D. A. J. Bacteriol. 171, 1320 (1989).

    Article  CAS  Google Scholar 

  23. Wells, J. A., Vasser, M. & Powers, D. B. Gene 34, 315 (1985).

    Article  CAS  Google Scholar 

  24. Whitaker, D. R. Meth. Enzymol. 19, 599 (1970).

    Article  Google Scholar 

  25. Hunkapiller, M. W., Smallcombe, S. H., Whitaker, D. R. & Richards, J. H. Biochemistry 12, 4732 (1973).

    Article  CAS  Google Scholar 

  26. Williams, J. W. & Morrison, J. F. Meth. Enzymol. 63, 437–467 (1979).

    Article  CAS  Google Scholar 

  27. Hendrickson, W. A. & Konnert, J. in Biomolecular Structure, Function, Conformation, and Evolution (ed. Srinivasam, R.), Vol. 1, 43–47 (Pergamon, Oxford, 1981).

    Book  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Bone, R., Silen, J. & Agard, D. Structural plasticity broadens the specificity of an engineered protease. Nature 339, 191–195 (1989). https://doi.org/10.1038/339191a0

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/339191a0

  • Springer Nature Limited

This article is cited by

Navigation