Abstract
The template-directed assembly of planar pentacene molecules on epitaxial graphene grown on Ru(0001) (G/Ru) has been investigated by means of low-temperature scanning tunneling microscopy (STM) and density functional theory (DFT) calculations. STM experiments find that pentacene adopts a highly selective and dispersed growth mode in the initial stage. By using DFT calculations including van der Waals interactions, we find that the configuration with pentacene adsorbed on face-centered cubic (fcc) regions of G/Ru is the most stable one, which accounts for the selective adsorption at low coverage. Moreover, at high coverage, we have successfully controlled the molecular assembly from amorphous, local ordering, to long-range order by optimizing the deposition rate and substrate temperature.
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Geim, A. K.; Novoselov, K. S. The rise of graphene. Nat. Mater. 2007, 6, 183–191.
Novoselov, K. S.; Geim, A. K.; Morozov, S. V.; Jiang, D.; Zhang, Y.; Dubonos, S. V.; Grigorieva, I. V.; Firsov, A. A. Electric field effect in atomically thin carbon films. Science 2004, 306, 666–669.
Pan, Y.; Zhang, H. G.; Shi, D. X.; Sun, J. T.; Du, S. X.; Liu, F.; Gao, H. J. Highly ordered, millimeter-scale, continuous, single-crystalline graphene monolayer formed on Ru(0001). Adv. Mater. 2009, 21, 2777–2780.
N’Diaye, A. T.; Bleikamp, S.; Feibelman, P. J.; Michely, T. Two-dimensional Ir cluster lattice on a graphene moire on Ir(111). Phys. Rev. Lett. 2006, 97, 215501.
Li, X. S.; Cai, W. W.; An, J. H.; Kim, S.; Nah, J.; Yang, D. X.; Piner, R.; Velamakanni, A.; Jung, I.; Tutuc, E.; et al. Large-area synthesis of high-quality and uniform graphene films on copper foils. Science 2009, 324, 1312–1314.
Kellar, J. A.; Alaboson, J. M. P.; Wang, Q. H.; Hersam, M. C. Identifying and characterizing epitaxial graphene domains on partially graphitized SiC(0001) surfaces using scanning probe microscopy. Appl. Phys. Lett. 2010, 96, 143103.
Berger, C.; Song, Z. M.; Li, X. B.; Wu, X. S.; Brown, N.; Naud, C.; Mayou, D.; Li, T. B.; Hass, J.; Marchenkov, A. N.; et al. Electronic confinement and coherence in patterned epitaxial graphene. Science 2006, 312, 1191–1196.
Mao, J. H.; Zhang, H. G.; Jiang, Y. H.; Pan, Y.; Gao, M.; Xiao, W. D.; Gao, H. J. Tunability of supramolecular kagome lattices of magnetic phthalocyanines using graphene-based moire patterns as templates. J. Am. Chem. Soc. 2009, 131, 14136–14137.
Roos, M.; Kunzel, D.; Uhl, B.; Huang, H. H.; Alves, O. B.; Hoster, H. E.; Gross, A.; Behm, R. J. Hierarchical interactions and their influence upon the adsorption of organic molecules on a graphene film. J. Am. Chem. Soc. 2011, 133, 9208–9211.
Zhang, H. G.; Sun, J. T.; Low, T.; Zhang, L. Z.; Pan, Y.; Liu, Q.; Mao, J. H.; Zhou, H. T.; Guo, H. M.; Du, S. X.; et al. Assembly of iron phthalocyanine and pentacene molecules on a graphene monolayer grown on Ru(0001). Phys. Rev. B 2011, 84, 245436.
Li, G.; Zhou, H. T.; Pan, L. D.; Zhang, Y.; Mao, J. H.; Zou, Q.; Guo, H. M.; Wang, Y. L.; Du, S. X.; Gao, H. J. Self-assembly of C60 monolayer on epitaxially-grown, nanostructured graphene on Ru(0001) surface. Appl. Phys. Lett. 2012, 100, 013304.
Zhang, H. G.; Xiao, W. D.; Mao, J. H.; Zhou, H. T.; Li, G.; Zhang, Y.; Liu, L. W.; Du, S. X.; Gao, H. J. Host-guest superstructures on graphene-based kagome lattice. J. Phys. Chem. C 2012, 116, 11091–11095.
Wang, Q. H.; Hersam, M. C. Room-temperature molecular-resolution characterization of self-assembled organic mono-layers on epitaxial graphene. Nat. Chem. 2009, 1, 206–211.
Wang, Q. H.; Hersam, M. C. Nanofabrication of hetero-molecular organic nanostructures on epitaxial graphene via room temperature feedback-controlled lithography. Nano Lett. 2011, 11, 589–593.
Barja, S.; Garnica, M.; Hinarejos, J. J.; de Parga, A. L. V.; Martin, N.; Miranda, R. Self-organization of electron acceptor molecules on graphene. Chem. Commun. 2010, 46, 8198–8200.
Huang, H.; Chen, S.; Gao, X. Y.; Chen, W.; Wee, A. T. S. Structural and electronic properties of PTCDA thin films on epitaxial graphene. ACS Nano 2009, 3, 3431–3436.
Wang, X.; Zhi, L. J.; Mullen, K. Transparent, conductive graphene electrodes for dye-sensitized solar cells. Nano Lett. 2008, 8, 323–327.
Liu, Z. F.; Liu, Q.; Huang, Y.; Ma, Y. F.; Yin, S. G.; Zhang, X. Y.; Sun, W.; Chen, Y. S. Organic photovoltaic devices based on a novel acceptor material: Graphene. Adv. Mater. 2008, 20, 3924–3930.
Liu, H. W.; Al-Mahboob, A.; Fujikawa, Y.; Fukui, N.; Hitosugi, T.; Hashizume, T.; Xue, Q. K.; Sakurai, T. Pentacene growth on graphite investigated by low-energy electron microscope. J. Cryst. Growth 2010, 312, 967–970.
Schroeder, P. G.; France, C. B.; Park, J. B.; Parkinson, B. A. Energy level alignment and two-dimensional structure of pentacene on Au(111) surfaces. J. Appl. Phys. 2002, 91, 3010–3014.
France, C. B.; Schroeder, P. G.; Forsythe, J. C.; Parkinson, B. A. Scanning tunneling microscopy study of the coverage-dependent structures of pentacene on Au(111). Langmuir 2003, 19, 1274–1281.
Shi, C.; Wei, C.; Han, H.; Gao, X. Y.; Qi, D. C.; Wang, Y. Z.; Wee, A. T. S. Template-directed molecular assembly on silicon carbide nanomesh: Comparison between CuPc and pentacene. ACS Nano 2010, 4, 849–854.
Gao, H. J.; Gao, L. Scanning tunneling microscopy of functional nanostructures on solid surfaces: Manipulation, self-assembly, and applications. Prog. Surf. Sci. 2010, 85, 28–91.
Yoo, S.; Domercq, B.; Kippelen, B. Efficient thin-film organic solar cells based on pentacene/C-60 heterojunctions. Appl. Phys. Lett. 2004, 85, 5427–5429.
Rao, A.; Wilson, M. W. B.; Hodgkiss, J. M.; Albert-Seifried, S.; Bassler, H.; Friend, R. H. Exciton fission and charge generation via triplet excitons in pentacene/C(60) bilayers. J. Am. Chem. Soc. 2010, 132, 12698–12703.
Vanderbilt, D. Soft self-consistent pseudopotentials in a generalized eigenvalue formalism. Phys. Rev. B 1990, 41, 7892–7895.
Kresse, G.; Furthmuller, J. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. Phys. Rev. B 1996, 54, 11169–11186.
Perdew, J. P.; Burke, K.; Ernzerhof, M. Generalized gradient approximation made simple. Phys. Rev. Lett. 1996, 77, 3865–3868.
Grimme, S. Semiempirical GGA-type density functional constructed with a long-range dispersion correction. J. Comput. Chem. 2006, 27, 1787–1799.
Bucko, T.; Hafner, J.; Lebegue, S.; Angyan, J. G. Improved description of the structure of molecular and layered crystals: Ab initio DFT calculations with van der Waals corrections. J. Phys. Chem. A 2010, 114, 11814–11824.
Lu, J.; Yeo, P. S. E.; Zheng, Y.; Yang, Z. Y.; Bao, Q. L.; Gan, C. K.; Loh, K. P. Using the graphene moiré pattern for the trapping of C60 and homoepitaxy of graphene. ACS nano 2012, 6, 944–950.
Gotzen, J.; Kafer, D.; Woll, C.; Witte, G. Growth and structure of pentacene films on graphite: Weak adhesion as a key for epitaxial film growth. Phys. Rev. B 2010, 81, 085440.
Zhou, H. T.; Mao, J. H.; Li, G.; Wang, Y. L.; Feng, X. L.; Du, S. X.; Mullen, K.; Gao, H. J. Direct imaging of intrinsic molecular orbitals using two-dimensional, epitaxially-grown, nanostructured graphene for study of single molecule and interactions. Appl. Phys. Lett. 2011, 99, 153101.
Barth, J. V.; Costantini, G.; Kern, K. Engineering atomic and molecular nanostructures at surfaces. Nature 2005, 437, 671–679.
Xiao, W. D.; Feng, X. L.; Ruffieux, P.; Groning, O.; Mullen, K.; Fasel, R. Self-assembly of chiral molecular honeycomb networks on Au(111). J. Am. Chem. Soc. 2008, 130, 8910–8912.
Palma, C. A.; Bjork, J.; Bonini, M.; Dyer, M. S.; Llanes-Pallas, A.; Bonifazi, D.; Persson, M.; Samori, P. Tailoring bicomponent supramolecular nanoporous networks: Phase segregation, polymorphism, and glasses at the solid-liquid interface. J. Am. Chem. Soc. 2009, 131, 13062–13071.
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Zhou, H., Zhang, L., Mao, J. et al. Template-directed assembly of pentacene molecules on epitaxial graphene on Ru(0001). Nano Res. 6, 131–137 (2013). https://doi.org/10.1007/s12274-013-0288-8
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DOI: https://doi.org/10.1007/s12274-013-0288-8