Abstract
This paper contains the review of quantum entanglement investigations in living systems, and in the quantum mechanically modelled photoactive prebiotic kernel systems. We define our modelled self-assembled supramolecular photoactive centres, composed of one or more sensitizer molecules, precursors of fatty acids and a number of water molecules, as a photoactive prebiotic kernel systems. We propose that life first emerged in the form of such minimal photoactive prebiotic kernel systems and later in the process of evolution these photoactive prebiotic kernel systems would have produced fatty acids and covered themselves with fatty acid envelopes to become the minimal cells of the Fatty Acid World. Specifically, we model self-assembling of photoactive prebiotic systems with observed quantum entanglement phenomena. We address the idea that quantum entanglement was important in the first stages of origins of life and evolution of the biospheres because simultaneously excite two prebiotic kernels in the system by appearance of two additional quantum entangled excited states, leading to faster growth and self-replication of minimal living cells. The quantum mechanically modelled possibility of synthesizing artificial self-reproducing quantum entangled prebiotic kernel systems and minimal cells also impacts the possibility of the most probable path of emergence of protocells on the Earth or elsewhere. We also examine the quantum entangled logic gates discovered in the modelled systems composed of two prebiotic kernels. Such logic gates may have application in the destruction of cancer cells or becoming building blocks of new forms of artificial cells including magnetically active ones.
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References
Adamo C, Barone V (1999) Toward reliable density functional methods without adjustable parameters: the PBE0 model. J Chem Phys 110:6158–6169
Becke AD (1993) A new mixing of Hartree-Fock and local density-functional theories. J Chem Phys 98:1372–1377
Brukner C, Zeilinger A (2009) Information invariance and quantum probabilities. Found Phys 39:677–689
Cai J, Popescu S, Briegel HJ (2010) Dynamic entanglement in oscillating molecules and potential biological implications. Phys Rev E Stat Nonlinear Soft Matter Phys 82:021921
Cape JL, Monnard PA, Boncella JM (2011) Prebiotically relevant mixed fatty acid vesicles support anionic solute encapsulation and photochemically catalysed trans-membrane charge transport. Chem Sci 2:661–671
Collini E, Wong CY, Wilk KE, Curmi PMG, Brumer P, Scholes GD (2010) Coherently wired light-harvesting in photosynthetic marine algae at ambient temperature. Nature 463:644–647
DeClue MS, Monnard PA, Bailey JA, Maurer SE, Collis GE, Ziock HJ, Rasmussen S, Boncella JM (2009) Nucleobase mediated, photocatalytic vesicle formation from an ester precursor. J Am Chem Soc 131:931–933
Ditchfield R, Hehre WJ, Pople JA (1971) Self-consistent molecular-orbital methods. IX. An extended Gaussian-type basis for molecular-orbital studies of organic molecules. J Chem Phys 54:724–728
Edson JB, Spencer LP, Boncella JM (2011) Photorelease of primary aliphatic and aromatic amines by visible-light-induced electron transfer. Org Lett 13:6156–6159
Eichkorn K, Treutler O, Öhm H, Häser M, Ahlrichs R (1995) Auxiliary basis sets to approximate coulomb potentials. Chem Phys Lett 242:652–660
Einstein A, Podolsky B, Rosen N (1935) Can quantum-mechanical description of physical reality be considered complete? Phys Rev 47:777–780. doi:10.1103/PhysRev.47.777
Engel GS, Calhoun TR, Read EL, Ahn TK, Mancal T, Cheng YC, Blankenship RE, Fleming GR (2007) Evidence for wavelike energy transfer through quantum coherence in photosynthetic complexes. Nature 446:782–786
Fedo CM, Whitehouse MJ (2002) Metasomatic origin of quartz–pyroxene rock, Akilia, Greenland, and implications for Earth’s earliest life. Science 296:1448–1452
Gessner MO, Newell SY (2002) Biomass, growth rate, and production of filamentous fungi in plant litter. In: Hurst CJ, Crawford RL, Knudsen G, McInerney M, Stetzenbach LD (eds) Manual of environmental microbiology, 2nd edn. ASM Press, Washington, pp 390–408
Grimme S (2006) Semiempirical GGA-type density functional constructed with a long-range dispersion correction. J Comp Chem 27:1787–1799
Holick MF (2003) Vitamin D: a millennium perspective. J Cell Biochem 88:296–307
Jensen F (1999) Introduction to computational chemistry. Wiley, Chichester
Lutz D (2011) WUSTL physicist debates ‘quantum mind’ at New York roundtable. Alford argues for intellectual humility and pragmatism with proponents of the quantum-mind theory of consciousness. Washington University in St. Louis. http://news.wustl.edu/news/Pages/21834.aspx. Accessed 10 May 2013
Maher KA, Stevenson DJ (1988) Impact frustration of the origin of life. Nature 331:612–614
Marques MAL, Ullrich CA, Nogueira F, Rubio A, Burke K, Gross EKU (2006) Time-dependent density functional theory. Lecture Notes in Physics. Springer, Berlin
Maurer SE, Deamer DW, Boncella JM, Monnard PA (2009) Chemical evolution of amphiphiles: glycerol monoacyl derivatives stabilize plausible prebiotic membranes. Astrobiology 9:979–987
Maurer SE, DeClue MS, Albertsen AN, Dorr M, Kuiper DS, Ziock H, Rasmussen S, Boncella JM, Monnard PA (2011) Interactions between catalysts and amphiphilic structures and their implications for a protocell model. ChemPhysChem 12:828–835
Mojzsis SJ, Arrhenius G, McKeegan KD, Harrison TM, Nutman AP, Friend CR (1996) Evidence for life on Earth before 3,800 million years ago. Nature 384:55–59
Morse JW, MacKenzie FT (1988) Hadean ocean carbonate chemistry. Aquat Geochem 4:301–319
Neese F (2003) A Spectroscopy oriented configuration interaction procedure. J Chem Phys 119:9428–9443
Neese F (2009) ORCA—an ab initio, density functional and semiempirical program package, Version 2.6.04. Max-Planck-Institut fur Bioanorganische Chemie, Muelheim an der Ruhr and Universitaet Bonn
Noffke N, Christian D, Wacey D, Hazen RM (2013) Microbially induced sedimentary structures recording an ancient ecosystem in the ca. 3.48 billion-year-old dresser formation, Pilbara, Western Australia. Astrobiology. doi:10.1089/ast.2013.1030
Nutman AP, Friend CRL, Paxton S (2009) Detrital zircon sedimentary provenance ages for the Eoarchaean Isua supracrustal belt southern West Greenland: juxtaposition of an imbricated ca. 3700 Ma juvenile arc against an older complex with 3920-3760 Ma components. Precambrian Res 172:212–233
Ohtomo Y, Kakegawa T, Ishida A, Nagase T, Rosing MT (2013) Evidence for biogenic graphite in early Archaean Isua metasedimentary rocks. Nat Geosci. doi:10.1038/ngeo2025
Pauls JA, Zhang Y, Berman GP, Kais S (2013) Quantum coherence and entanglement in the avian compass. Phys Rev E Stat Nonlinear Soft Matter Phys 87:062704
Perdew JP, Burke K, Ernzerhof M (1996) Generalized gradient approximation made simple. Phys Rev Lett 77:3865–3868
Rasmussen S, Chen L, Nilsson M, Abe S (2003) Bridging nonliving and living matter. Artif Life 9:269–316
Rasmussen S, Bailey J, Boncella J, Chen L, Collis G, Colgate S, DeClue M, Goranovic G, Jiang Y, Sen A, Shreve A, Tamulis A, Travis B, Weronski P, Woodruff WH, Zhang J, Zhou X, Ziock H (2008) Assembly of a minimal protocell. In: Rasmussen S, Bedau MA, Chen L, Deamer D, Krakauer DC, Packard NH, Stadler PF (eds) Protocells: bridging nonliving and living matter. MIT Press, Cambridge, pp 125–156
Rieper R, Anders J, Vedral V (2011) Quantum entanglement between the electron clouds of nucleic acids in DNA. arXiv.org e-Print archive. http://arxiv.org/abs/1006.4053v2
Rinkevicius Z, Tamulis A, Tamuliene J (2006) Beta-Diketo Structure for quantum information processing. Lith J Phys 46:413–416
Sarovar M, Ishizaki A, Fleming GR, Whaley KB (2010) Quantum entanglement in photosynthetic light harvesting complexes. Nat Phys 6:462–467
Schmidt MW, Baldridge KK, Boatz JA, Elbert ST, Gordon MS, Jensen JH, Koseki S, Matsunaga N, Nguyen KA, Su S, Windus TL, Dupuis M, Montgomery JA (1993) General atomic and molecular electronic structure system. J Comput Chem 14:1347–1363
Schopf JW, Kudryavtsev AB, Agresti DG, Wdowiak TJ, Czaja AD (2002) Laser-Raman imagery of Earth’s earliest fossils. Nature 416:73–76
Schrödinger E, Born M (1935) Discussion of probability relations between separated systems. Math Proc Camb 31:555–563
Schrödinger E, Dirac PAM (1936) Probability relations between separated systems. Math Proc Camb 32:446–452
Schuchardt KL, Didier BT, Elsethagen T, Sun L, Gurumoorthi V, Chase J, Li J, Windus TL (2007) Basis set exchange: a community database for computational sciences. J Chem Inf Model 47:1045–1052
Tamuliene J, Tamulis A, Kulys J (2004) Electronic structure of dodecyl syringate radical suitable for ESR molecular quantum computers. Nonlinear Anal Mod Control 9:185–196
Tamulis A (2008a) Quantum mechanical interpretation of the origin of life. In: Ruksenas O (ed) Science in the Faculty of Natural Sciences of Vilnius University, Proceedings of 5th science conference. Publishing house of Vilnius University, Vilnius, Lithuania, pp 7–19
Tamulis A (2008b) Quantum self-assembly of artificial minimal living cells and molecular electronics control. Viva Origino 36:10–19
Tamulis A (2008c) Quantum mechanical control of artificial minimal living cells. NeuroQuantology 6:311–322
Tamulis A (2011) Quantum mechanical investigations of photosynthetic systems of artificial minimal cells based on 8-oxo-guanine-Ru(bipyridine)(3)(2+). J Comput Theor Nanosci 8:624–636
Tamulis A, Grigalavicius M (2010a) Quantum mechanical evolution of fatty acids world life. Viva Origino 38:4–17
Tamulis A, Grigalavicius M (2010b) Quantum mechanical origin of genetic material in minimal protocells. J Comput Theor Nanosci 7:1831–1841
Tamulis A, Grigalavicius M (2011) The emergence and evolution of life in a “fatty acid world” based on quantum mechanics. Orig Life Evol Biosph 41:51–71
Tamulis A, Grigalavicius M (2013) Molecular spintronics control of photosynthesis in artificial cell. J Comput Theor Nanosci 10:989–995
Tamulis A, Grigalavicius M (2014) Quantum mechanical origin of fatty acid life and correlations with anthropic principle and Old Testament. Quantum Matter 3:460–468
Tamulis A, Tamulis V (2007a) Quantum self-assembly and photoinduced electron tunneling in photosynthetic system of minimal living cell. Viva Origino 35:66–72
Tamulis A, Tamulis V (2007b) Question 9: quantum self-assembly and photoinduced electron tunnelling in photosynthetic systems of artificial minimal living cells. Orig Life Evol Biosph 37:473–476
Tamulis A, Tamulis V (2008) Quantum mechanical design of molecular electronics OR gate for regulation of minimal cell functions. J Comput Theor Nanosci 5:545–553
Tamulis A, Tamuliene J, Tamulis V (2003a) Quantum mechanical design of photoactive molecular machines and logical devices. In: Nalwa HS (ed) Handbook of photochemistry and photobiology, supramolecular photochemistry. American Scientific Publishers, Stevenson Ranch, pp 495–553
Tamulis A, Tsifrinovich VI, Tretiak S, Berman GP, Allara DL (2003b) Neutral radical molecules ordered in self-assembled monolayer systems for quantum information processing. arXiv.org e-Print archive. http://arxiv.org/abs/quant-ph/0307136
Tamulis A, Tamuliene J, Tamulis V, Ziriakoviene A (2004) Quantum mechanical design of molecular computers elements suitable for self-assembling to quantum computing living systems. In: 6th international conference on self-formation theory and applications. Scintec Publications, Switzerland, pp 175–180
Tamulis A, Tamulis V, Graja A (2006) Quantum mechanical modeling of self-assembly and photoinduced electron transfer in PNA-based artificial living organisms. J Nanosci Nanotechnol 6:965–973
Tamulis A, Tamulis V, Ziock H, Rasmussen S (2008) Influence of water and fatty acid molecules on quantum photoinduced electron tunnelling in photosynthetic systems of PNA based self-assembled protocells. In: Ross R, Mohanty S (eds) Multiscale simulation methods for materials. Wiley, New Jersey, pp 9–28
Tamulis A, Grigalavicius M, Medzevicius G, Krisciukaitis S (2012) Quantum entangled photosynthesis and or logic gates controlling minimal artificial cell. J Comput Theor Nanoseci 9:351–359
Tamulis A, Grigalavicius M, Baltrusaitis J (2013) Phenomenon of quantum entanglement in a system composed of two minimal protocells. Orig Life Evol Biosph 43:49–66
Tamulis A, Grigalavicius M, Krisciukaitis S (2014) Quantum entanglement in a system composed of two prebiotic kernels with molecular spintronics logic devices for control of photosynthesis. J Comput Theor Nanosci 11
Treutler O, Ahlrichs R (1995) Efficient molecular numerical integration schemes. J Chem Phys 102:346–354
TURBOMOLE V6.0 (2009) A development of University of Karlsruhe and Forschungszentrum Karlsruhe GmbH, 1989–2007. TURBOMOLE GmbH, since 2007. www.turbomole.com
Weigend F, Ahlrichs R (2005) Balanced basis sets of split valence, triple zeta valence and quadruple zeta valence quality for H to Rn: design and assessment of accuracy. Phys Chem Chem Phys 7:3297–3305
Wilde SA, Valley JW, Peck WH, Graham CM (2001) Evidence from detrital zircons for the existence of continental crust and oceans on the Earth 4.4 Gyr ago. Nature 409:175–178
Acknowledgments
Authors are grateful to Dr. Jonas Baltrusaitis who was a member of the Departments of Chemistry and Chemical/Biochemical Engineering, EMRB 75 University of Iowa, Iowa City, IA 52242, USA until July 2012 and grateful for the use of the computing facilities at the University of Iowa for the quantum chemical calculations of photosynthetic prebiotic kernels (4) and (7) presented in this review. The quantum mechanical investigations of separate molecules and photoactive prebiotic kernels as well as the preliminary calculations of systems of prebiotic kernels presented in this article were performed on the Linux servers cluster of Vilnius University Institute of Theoretical Physics and Astronomy purchased using funds of European Union FP6 project “Programmable Artificial Cell Evolution”.
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Tamulis, A., Grigalavicius, M. Quantum entanglement in photoactive prebiotic systems. Syst Synth Biol 8, 117–140 (2014). https://doi.org/10.1007/s11693-014-9138-6
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DOI: https://doi.org/10.1007/s11693-014-9138-6
Keywords
- Photosynthetic prebiotic kernel
- Quantum self-assembly of prebiotic kernel
- Quantum entangled molecular orbitals
- Photosynthesis in prebiotic kernels
- Quantum entangled photosynthesis
- Photosynthetic minimal cell
- Electron density transfer
- Electron spin density transfer
- Quantum entanglement in systems composed of two prebiotic kernels
- Molecular quantum entangled logical gates