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Geographic distribution and sequence diversity of the mycovirus Botrytis virus F

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Abstract

Mycoviruses are obligate species that are found throughout all subdivisions of the fungal kingdom, with more constantly being discovered. However, only limited information is available about their mode of transmission and distribution. This research describes the distribution and sequence diversity of the Botrytis virus F (BotV-F) mycovirus from a survey of 84 Botrytis cinerea isolates collected from New Zealand and around the world. Using an RT-PCR approach, 12 BotV-F positive isolates were discovered, but there was no correlation to either plant host or geographic region from which the fungus was isolated. Subsequent phylogenetic analysis of BotV-F sequences suggest that this mycovirus has had a long association with B. cinerea, and has been co-distributed worldwide as B. cinerea has spread. In addition, these results suggest that the B. cinerea vegetative incompatibility mechanism may not completely prevent transmission of mycoviruses like BotV-F between fungal isolates from different compatibility groups. The potential utility of mycovirus sequence analysis to studies of fungal populations is discussed.

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References

  • Amselem J, Cuomo CA, van Kan JAL, Viaud M, Benito EP, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S, Fournier E, Gout L, Hahn M, Kohn L, Lapalu N, Plummer KM, Pradier J-M, Quévillon E, Sharon A, Simon A, ten Have A, Tudzynski B, Tudzynski P, Wincker P, Andrew M, Anthouard V, Beever RE, Beffa R, Benoit I, Bouzid O, Brault B, Chen Z, Choquer M, Collémare J, Cotton P, Danchin EG, Da Silva C, Gautier A, Giraud C, Giraud T, Gonzalez C, Grossetete S, Güldener U, Henrissat B, Howlett BJ, Kodira C, Kretschmer M, Lappartient A, Leroch M, Levis C, Mauceli E, Neuvéglise C, Oeser B, Pearson M, Poulain J, Poussereau N, Quesneville H, Rascle C, Schumacher J, Ségurens B, Sexton A, Silva E, Sirven C, Soanes DM, Talbot NJ, Templeton M, Yandava C, Yarden O, Zeng Q, Rollins JA, Lebrun M-H, Dickman M (2011) Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. PLoS Genet 7(8):e1002230. doi:10.1371/journal.pgen.1002230

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Beever R, Weeds P (2004) Taxonomy and genetic variation of Botrytis and Botryotinia. In: Elad Y, Williamson B, Tudzynski P, Delen N (eds) Botrytis: biology, pathology and control. Kluwer, Dordrecht, pp 29–52

    Google Scholar 

  • Boine B, Kingston RL, Pearson MN (2012) Recombinant expression of the coat protein of Botrytis virus X and development of an immunofluorescence detection method to study its intracellular distribution in Botrytis cinerea. J Gen Virol 93(Pt 11):2502–2511

    Article  CAS  PubMed  Google Scholar 

  • Boland GJ (2004) Fungal viruses, hypovirulence, and biological control of Sclerotinia species. Can J Plant Pathol 26(1):6–18

    Article  Google Scholar 

  • Buck K (1998) Molecular variability of viruses of fungi. In: Bridge PD, Couteaudier Y, Clackson JM (eds) Molecular variability of fungal pathogens. CAB International, Wallingford, pp 53–72

    Google Scholar 

  • Castro M, Kramer K, Valdivia L, Ortiz S, Benavente J, Castillo A (1999) A new double-stranded RNA mycovirus from Botrytis cinerea. FEMS Microbiol Lett 175(1):95–99

    Article  CAS  PubMed  Google Scholar 

  • Castro M, Kramer K, Valdivia L, Ortiz S, Castillo A (2003) A double-stranded RNA mycovirus confers hypovirulence-associated traits to Botrytis cinerea. FEMS Microbiol Lett 228(1):87–91

    Article  CAS  PubMed  Google Scholar 

  • Deng F, Melzer MS, Boland GJ (2002) Vegetative compatibility and transmission of hypovirulence-associated dsRNA in Sclerotinia homoeocarpa. Can J Plant Pathol 24:481–488

    Article  Google Scholar 

  • Domingo E, Holland J (1997) RNA virus mutations and fitness for survival. Annu Rev Microbiol 51:151–178

    Article  CAS  PubMed  Google Scholar 

  • Elad Y, Williamson B, Tudzynski P, Delen N (2004) Botrytis: biology, pathology and control. Kluwer, Dordrecht

  • Gobbin D, Hoegger PJ, Heiniger U, Rigling D (2003) Sequence variation and evolution of Cryphonectria hypovirus 1 (CHV-1) in Europe. Virus Res 97:39–46

    Article  CAS  PubMed  Google Scholar 

  • Hosid E, Grishkan I, Frenkel Z, Wasser SP, Nevo E, Korol A (2008) Diversity of microsatellites in natural populations of ascomycetous fungus, Emericella nidulans, in Israel on local and regional scales. Mycol Prog 7(2):99–109. doi:10.1007/s11557-008-0557-1

    Article  Google Scholar 

  • Howitt R (1998) Characterisation of mycoviruses in the plant pathogenic fungus, Botrytis cinerea. PhD thesis, University of Auckland, Auckland

  • Howitt R, Beever R, Pearson M, Forster R (1995) Presence of double-stranded RNA and virus-like particles in Botrytis cinerea. Mycol Res 99:1472–1478

    Article  CAS  Google Scholar 

  • Howitt R, Beever R, Pearson M, Forster R (2001) Genome characterization of Botrytis virus F, a flexuous rod-shaped mycovirus resembling plant ‘potex-like’ viruses. J Gen Virol 82:67–78

    CAS  PubMed  Google Scholar 

  • Howitt R, Beever RE, Pearson M, Forster RLS (2006) Genome characterization of a flexuous rod-shaped mycovirus, Botrytis virus X, reveals high amino acid identity to genes from plant potex-like viruses. Arch Virol 151:563–579

  • Milgroom MG, Cortesi P (2004) Biological control of chesnut blight with hypovirulence: a critical analysis. Annu Rev Phytopathol 42:311–338

    Article  CAS  PubMed  Google Scholar 

  • Pearson MN, Bailey AM (2013) Viruses of Botrytis. In: Said AG (ed) Advances in virus research, vol 86. Academic, New York, pp 249–272

  • Pearson MN, Beever RE, Boine B, Arthur K (2009) Mycoviruses of filamentous fungi and their relevance to plant pathology. Mol Plant Pathol 10(1):115–128

    Article  CAS  PubMed  Google Scholar 

  • Peever TL, Liu YC, Cortesi P, Milgroom M (1997) Diversity of hypoviruses and other double-stranded RNAs in Cryphonectria parasitica in North America. Phytopathology 87:1026–1033

    Article  CAS  PubMed  Google Scholar 

  • Potgieter C, Castillo A, Castro M, Cottet L, Morales A (2013) A wild-type Botrytis cinerea strain co-infected by double-stranded RNA mycoviruses presents hypovirulence-associated traits. Virol J 10(1):220

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Rodríguez-García C, Medina V, Alonso A, Ayllón MA (2014) Mycoviruses of Botrytis cinerea isolates from different hosts. Ann Appl Biol 164(1):46–61

    Article  Google Scholar 

  • Salas-Lizana R, Santini N, Miranda-Pérez A, Piñero D (2012) The Pleistocene glacial cycles shaped the historical demography and phylogeography of a pine fungal endophyte. Mycol Prog 11(2):569–581

    Article  Google Scholar 

  • Sotirovski K, Rigling D, Heiniger U, Milgroom M (2011) Variation in virulence of Cryphonectria hypovirus 1 in Macedonia. For Pathol 41:59–65

    Article  Google Scholar 

  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30(12):2725–2729. doi:10.1093/molbev/mst197

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Vilches S, Castillo A (1997) A double-stranded RNA mycovirus in Botrytis cinerea. FEMS Micrpbiology Lett 155:125–130

    Article  CAS  Google Scholar 

  • Wu MD, Zhang L, Li G, Jiang D, Hou MS, Hunag HC (2007) Hypovirulence and double-stranded RNA in botrytis cinerea. Phytopathology 97(12):1590–1599

    Article  CAS  PubMed  Google Scholar 

  • Wu MD, Zhang L, Li G, Jiang D, Ghabrial S (2010) Genome characterization of a debilitation-associated mitovirus infecting the phytopathogenic fungus Botrytis cinerea. Virology 406(1):117–126

    Article  CAS  PubMed  Google Scholar 

  • Wu MD, Jin F, Zhang J, Yang L, Jiang D, Li J (2012) Charcaterization of a novel bipartite double-stranded RNA mycovirus conferring hypovirulence in the pathogenic fungus Botrytis porri. J Virol 86(12):6605–6619

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Yaegashi H, Nakamura H, Sawahata T, Sasaki A, Iwanami T, Ito T, Kanematsu S (2012) Appearance of mycovirus-like double-stranded RNAs in the white root rot fungus, Rosellinia necatrix, in an apple orchard. FEMS Microbiol Ecol 83(1):49–62

    Article  PubMed  Google Scholar 

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Correspondence to Kieren Arthur.

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Ross Beever is deceased, 3rd June 2010, formerly Landcare Research Manaaki Whenua, Auckland, New Zealand

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Arthur, K., Pearson, M. Geographic distribution and sequence diversity of the mycovirus Botrytis virus F . Mycol Progress 13, 1000 (2014). https://doi.org/10.1007/s11557-014-1000-4

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  • DOI: https://doi.org/10.1007/s11557-014-1000-4

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