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Discovering active compounds from mixture of natural products by data mining approach

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Abstract

Traditionally, active compounds were discovered from natural products by repeated isolation and bioassays, which can be highly time consuming. Here, we have developed a data mining approach using the casual discovery algorithm to identify active compounds from mixtures by investigating the correlation between their chemical composition and bioactivity in the mixtures. The efficacy of our algorithm was validated by the cytotoxic effect of Panax ginseng extracts on MCF-7 cells and compared with previous reports. It was demonstrated that our method could successfully pick out active compounds from a mixture in the absence of separation processes. It is expected that the presented algorithm can possibly accelerate the process of discovering new drugs.

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Acknowledgments

This project was financially supported by the Chinese National Basic Research Priorities Program (No. 2005CB523402), the Program for New Century Excellent Talents in University of China (No. NCET-06-0515) and the Science and Technology Development Program of Zhejiang Province (No. 2006C33024).

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Correspondence to Yiyu Cheng.

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Wang, Y., Jin, Y., Zhou, C. et al. Discovering active compounds from mixture of natural products by data mining approach. Med Biol Eng Comput 46, 605–611 (2008). https://doi.org/10.1007/s11517-008-0323-1

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  • DOI: https://doi.org/10.1007/s11517-008-0323-1

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