Abstract
Tayassuidae is a family of pig-like Artiodactyla restricted to the New World. Despite its rich fossil history, they have received less attention from a taxonomic and phylogenetic perspective when compared to the Old World pigs, Suidae. In this study, we performed a computer assisted phylogenetic analysis using morphological and molecular data including fossil and extant Tayassuidae, using parsimony and Bayesian approaches. We recovered the monophyly of the family Tayassuidae, confirming previous proposals, as well as the monophyly of the subfamilies Hesperhyinae and Tayassuinae, and the genus Platygonus, which we placed in a new taxon of tribe level. The three living peccaries and a number of fossil species belong to a new, tribe level, monophyletic group. The genus Catagonus comes out as paraphyletic, leading us to propose to restrict the generic name to the type species, C. metropolitanus, and a new taxonomic arrangement for the remaining species previously included in it, revalidating the genera Brasiliochoerus and Parachoerus, and describing a new genus, Protherohyus, gen. nov.
Similar content being viewed by others
References
Ameghino F (1886) Contribución al conocimiento de los mamíferos fósiles de los terrenos terciarios antiguos del Paraná. Bol Acad Nac Cienc 9: 5–228
Ameghino F (1904) Nuevas especies de mamíferos cretáceos y terciarios de la República Argentina. An Soc Cien Argent 58:1–188
Ameghino F (1908) Las formaciones sedimentarias de la región litoral de Mar del Plata y Chapalmalán. An Mus Nac Bs As 10(3):343–428
Cione AL, Gasparini GM, Soibelzon E, Soibelzon LH, Tonni EP (2015) The Great American Biotic Interchange. A South American Perspective. Springer Brief Monographies in Earth System Sciences. Springer, Dordecht, 97 pp
Dalquest WW, Mooser O (1980) Late Hemphillian mammals of the Ocote local fauna, Guanojuato, Mexico. Pearce-Sellards Series 32:1–25
Darriba D, Taboada GL, Doallo R, Posada D (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9(8):772
Depéret C (1892) Sur la faune d'oiseaux pliocènes du Roussillon. Comptes Rendus des Séances Hebdomadaires de l'Académie des Sciences (Paris) 114:690–692
de Pinna, MCC (1991) Concepts and tests of homology in the cladistic paradigm. Cladistics 7(4):367–394
Frailey CD, Campbell KE Jr (2012) Two new genera of peccaries (Mammalia, Artiodactyla, Tayassuidae) from upper Miocene deposits of the Amazon Basin. J Paleontol 86: 852–877
Gasparini GM (2007) Sistemática, biogeografía, ecología y bioestratigrafía de los Tayassuidae (Mammalia, Artiodactyla) fósiles y actuales de América del Sur, con especial énfasis en las especies fósiles de la provincia de Buenos Aires. Ph.D. Thesis Universidad Nacional de La Plata, Argentina
Gasparini, GM (2013) Records and stratigraphical ranges of South American Tayassuidae (Mammalia, Artiodactyla). J Mammal Evol 20(1): 57–68
Gasparini GM, Kerber L, Oliveira EV (2009) Catagonus stenocephalus (Lund in Reinhardt, 1880) (Mammalia, Tayassuidae) in the Touro Passo Formation (late Pleistocene), Rio Grande do Sul, Brazil. Taxonomic and palaeoenvironmental comments. Neues Jahrb Geol Paläontol 254(3): 261–273
Gasparini GM, Ortiz Jaureguizar E, Carlini AA (2006) Familia Tayassuidae. In: Bárquez RM, Díaz MM, Ojeda RA (eds) Los Mamíferos de Argentina: Sistemática distribución. Publicación Especial de la Sociedad Argentina para el Estudio de los Mamíferos (SAREM), pp 114–115
Gasparini GM, Rodriguez SP, Soibelzon LH, Beilinson E, Soibelzon E, Missagia RV (2014) Tayassu pecari (Link, 1795) (Mammalia, Cetartiodactyla): comments on its South American fossil record, taxonomy and paleobiogeography. Hist Biol 26(6): 785–800
Gasparini GM, Ubilla M, Tonni EP (2013) The Chacoan peccary, Catagonus wagneri (Mammalia, Tayassuidae), in the late Pleistocene (northern Uruguay, South America): paleoecological and paleobiogeographic considerations. Hist Biol 25 (5–6): 679–690
Gazin CL (1938) Fossil peccary remains from the upper Pliocene of Idaho. J Wash Acad Sci 28(2):41–48
Gervais P (1852) Zoologie et paleontologie françaises (animaux vertebres) ou nouvelles recherches sur les animaux vivants et ´ fossiles de la France. Arthus Bertrand, Paris. pp 271
Gervais P (1867–1869) Zoologie et Paléontologie générales. – Nouvelles recherches sur les vertébrés vivants et fossiles (Première série). A. Bertrand, Paris
Gidley JW (1904) New or little known mammals of Miocene of South Dakota; American Museum Expedition of 1903. Bull Am Mus Nat Hist 20: 241–268
Gidley JW (1920) Pleistocene Peccaries from the Cumberland Cave Deposit. US Government Printing Office
Goloboff PA (1993) Estimating character weights during tree search. Cladistics 9(1):83–91
Goloboff PA (2014) Extended implied weighting. Cladistics 30(3):260–272
Goloboff PA, Farris JS (2001) Methods for quick consensus estimate. Cladistics 17(1):S26-S34
Goloboff PA, Farris JS, Nixon KC (2008) TNT, a free program for phylogenetic analysis. Cladistics 24(5):774–786
Gongora J, Biondo C, Cooper JD, Taber A, Keuroghlian A, Altricher M, Nascimento FFdo, Chong AY, Miyaki CY, Bodmer R, Mayor P, González S (2011) Revisiting the species status of Pecari maximus van Roosmalen et al., 2007 Mammalia) from the Brazilian Amazon. Bonn Zool Bull 60:95–101
Gongora J, Moran C (2005) Nuclear and mitochondrial evolutionary analyses of collared, white-lipped, and Chacoan peccaries (Tayassuidae). Mol Phylogenet Evol 34:181–189
Gray JE (1821) On the natural arrangement of vertebrose animals. Lond Med Repository 15(1):296–306
Groves C, Grubb P (2011). Ungulate Taxonomy. Johns Hopkins University Press, Baltimore
Grubb P (2005) Order Artiodactyla. In: Wilson DE, Reeder DM (eds) Mammal Species of the World: A Taxonomic and Geographic Reference, 3rd edn. The Johns Hopkins University Press, Baltimore, pp 637–722
Guindon S, Gascuel O (2003) A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Syst Biol 52:696–704
Harris, JM, Liu, LP (2007) Superfamily Suoidea. The evolution of Artiodactyla. Baltimore, USA. The Johns Hopkins University Press. pp. 130–150
Harrison LB, Larsson HCE (2015) Among-character rate variation distributions in phylogenetic analysis of discrete morphological characters. Syst Biol 64(2): 307–324
Hay OP (1902) Bibliography and catalogue of the Fossil Vertebrata of North America. Bull US Geolo Survey 179: 1–868
Huelsenbeck JP, Ronquist F (2001) MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17(8):754–755
Huelsenbeck JP, Ronquist, F, Nielsen R, Bollback JP (2001) Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294: 2310–2314
Jaeckel OMJ (1911) Die Wirbeltiere. Eine Übersicht über die fossilen und lebenden Formen. Gebrüder Bornträger, Berlin
Kraglievich L, Rusconi C (1931) Restos de vertebrados vivientes y extinguidos hallados por los señores ER Wagner y hermano en túmulos precolombinos de Santiago del Estero. Physis 10(36):248–252
Kück P, Meusemann K (2010) FASconCAT: convenient handling of data matrices. Mol Phylogenet Evol 56(3):1115–1118
Le Conte JL (1848) On Platygonus compressus: a new fossil pachyderm. Mem Am Acad Arts Sci 3(8):257–274
Leidy J (1850) Observations on two new genera of fossil Mammalia, Eucrotophus jacksoni, and Archaeotherium mortoni. Proc Acad Nat Sci Philadelphia 5:90–93
Leidy J (1869) The extinct mammalian fauna from Dakota and Nebraska including an account of some allied forms from other localities. Proc Acad Nat Sci Philadelphia 7:385
Lewis PO (2001) A likelihood approach to estimating phylogeny from discrete morphological character data. Syst Biol 50(6):913–925
Link DHF (1795) Beiträge zur Naturgeschichte. Rostock und Leipzig 2:1–126
Linnaeus C (1758) Systema naturae per regna tria naturae, secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis. 10th ed. Laurentii Salvii
Liu L-P (2003) Chinese fossil Suoidea systematics, evolution, and paleoecology. Helsinki University Printing House, Helsinki, pp 144
Lund PW (1838- 1841) Blik paa Brasiliens Dyreverden för Sidste Jordmvaelting. Tredie Afhandling: Fortsaettelse af Patterdryene, Lagoa Santa
Maddison WP, Maddison DR (2011) Mesquite: a modular system for evolutionary analysis. Version 2.75. Available at: http://www.mesquiteproject.org/mesquite/download/download.html.
McKenna MC, Bell SK (1997) Classification of Mammals above the Species Level. Columbia University Press, New York
Menégaz AN, Ortiz Jaureguizar E (1995) Los artiodáctilos. In: Alberdi MT, Leone G, Tonni EP (eds) Evolución biológica y climática de la región Pampeana durante los últimos cinco millones de años. Un ensayo de correlación con el Mediterráneo occidental. Monografías CSIC, Madrid
Mirande MJ (2009) Weighted parsimony phylogeny of the family Characidae (Teleostei: Characiformes). Cladistics 25(6): 574–613
Nixon KC (1999–2002) WinClada ver. 1.0000. Published by the author, Ithaca
O’Leary MA (2010) An anatomical and phylogenetic study of the osteology of the petrosal of extant and extinct artiodactylans (Mammalia) and relatives. Bull Am Mus Nat Hist 335: 1–206
Orliac MJ (2013) The petrosal bone of extinct Suoidea (Mammalia, Artiodactyla). J Syst Palaeontol 11(8): 925–945
Orliac MJ, Antoine P-O, Ducrocq S (2010) Phylogenetic relationships of the family Suidae, new insights on the relationships among Suoidea. Zool Scripta 39: 315–330
Owen R (1838) Fossil Mammalia. In: Darwin CR (ed) Zoology of the Voyage of H.M.S. Beagle, under the Command of Captain Fitz Roy, RN., during the Years 1832 to 1836. Smith, Elder and Co., London, pp 1–40
Palmer TS (1897) Notes on the nomenclature of four genera of tropical American mammals. Proc Biol Soc Wash 11:173–174
Parisi Dutra R, Missagia RV, Perini FA, Cozzuol MA, Gasparini GM, Guedes PG, Salles LDO (2016) Fossil peccaries of late Pleistocene/Holocene (Cetartiodactyla, Tayassuidae) from underwater caves of Serra da Bodoquena (Mato Grosso do Sul State, Brazil). Hist Biol doi: 10.1080/08912963.2015.1125898
Paula Couto C de (1950) Memórias sobre a paleontologia brasileira. Instituto Nacional do Livro, Rio de Janeiro
Paula Couto, C de (1981) On an extinct peccary from the Pleistocene of Minas Gerais. Iheringia Série Geologia, Porto Alegre 6:75–78
Peterson OA (1905) New suilline remains from the Miocene of Nebraska. Mem Carnegie Mus 4:41–156
Pickford M (2011) Small suoids from the Miocene of Europe and Asia. Estudios Geol 67(2): 541–578
Pickford M, Moya-Sola S (1994) Taucanamo (Suoidea, Tayassuidae) from the middle Miocène (MN04a) of Els Casots. CR Acad Sci Paris, Barcelona, Spain 319, série 11: 15
Pol D, Escapa IH (2009) Unstable taxa in cladistic analysis: identification and the assessment of relevant characters. Cladistics 25(5):515–527
Prothero DR (2009) The early evolution of the north American peccaries (Artiodactyla: Tayassuidae). Mus North Ariz Bull 65:509–541
Prothero DR (2015) Evolution of the early Miocene Hesperhine peccaries. New Mexico Mus Nat Hist Sci Bull 67: 235–256
Prothero DR, Grenader J (2012) A new primitive species of the flat-headed peccary Platygonus (Tayassuidae, Artiodactyla, Mammalia) from the late Miocene of the High Plains. J Paleontol 86(06):1021–1031
Prothero DR, Pollen A (2013) New late Miocene peccaries from California and Nebraska. Kirtlandia 58: 42–43
Rambaut A, Suchard MA, Xie D, Drummond AJ (2014) Tracer v1. 6.
Reig OA (1952) Descripción previa de nuevos ungulados y marsupiales fósiles del Plioceno y del Eocuartario argentinos. Revista del Museo Municipal de Ciencias Naturales y Tradicional de Mar del Plata 1: 119–129
Reinhardt J (1880) De I de brasilianske knoglehuler fundne Navlesvin Arter. Videnskabelige Meddlelser fra den Naturhistorike Forening I Kjoberhavn. Copenhague
Ronquist F, Huelsenbeck J (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19(12): 1572–1574
Ronquist F, Huelsenbeck J, Teslenko M (2011) Draft MrBayes version 3.2 manual: tutorials and model summaries. Distributed with the software from http://brahms.biology.rochester.edu/software.html.
Rusconi C (1930) Las especies fósiles argentinas de pecarí es y sus relaciones con las del Brasil y Norteamérica. An Mus Nac Hist Nat Bernardino Rivadavia 36:121–241
Rusconi C (1948) Restos de platigonos y malformaciones oseas procedentes de los túmulos indígenas de Santiago del Estero. Rev Mus Hist Nat Mendoza 2:231–239
Spencer MR, Wilberg EW (2013) Efficacy or convenience? Model-based approaches to phylogeny estimation using morphological data. Cladistics 29(6):663–671
Stock C (1937) A peccary skull from the Barstow Miocene, California. Proc Natl Acad Sci 23(7):398–404
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 30:2725–2729
Van der Made J (1997) Systematics and stratigraphy of the genera Taucanamo and Schizochoerus and a classification of the Palaeochoeridae (Suoidea, Mammalia). Proc Kon Ned Akad Wet: 100:127–139
Wagner PJ (2012) Modelling rate distributions using character compatibility: implications for morphological evolution among fossil invertebrates. Biol Lett 8:143–146
Wetzel RM, Dubos RE, Martin RL, Myers P (1975) Catagonus, an “extinct” peccary, alive in Paraguay. Science 189(42):379–381
White TE (1942) Additions to the fauna of the Florida phosphates. Proc New Engl ZooClub 21:87–91
Woodburne MO (1969) A late Pleistocene occurrence of collared pecary, Dicotyles tajacu, in Guatemala. J Mammal 50: 121–125
Wright AM, Hillis DM (2014) Bayesian analysis using a simple likelihood model outperforms parsimony for estimation of phylogeny from discrete morphological data” PLoS ONE 9.10:e109210.
Wright AM, Lloyd GT, Hillis DM (2015) Modeling character change heterogeneity in phylogenetic analyses of morphology through the use of priors. Syst Biol doi: 10.1093/sysbio/syv122
Wright DB (1989) Phylogenetic relationships of Catagonus wagneri: sister taxa from the Tertiary of North America. In: Eisenberg JF, Redford KH (eds) Advances in Neotropical Mammalogy. Sandhill Crane Press, Gainsville, pp 281–308
Wright DB (1998) Tayassuidae. In: Janis CM, Scott KM, Jacobs LL (eds) Evolution of Tertiary Mammals of North America. Volume 1. Terrestrial Carnivores, Ungulates, and Ungulatelike Mammals. Cambridge University Press, New York, pp 389–400
Acknowledgments
The authors thank to the Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), CAPES and FAPEMIG for financial support; and the authorities of palaeontological collections for providing material for analysis. We also want to thank Barbara Rossi (UFMG) for the drawings of skulls and living taxa on the phylogeny.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Parisi Dutra, R., Casali, D.d.M., Missagia, R.V. et al. Phylogenetic Systematics of Peccaries (Tayassuidae: Artiodactyla) and a Classification of South American Tayassuids. J Mammal Evol 24, 345–358 (2017). https://doi.org/10.1007/s10914-016-9347-8
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10914-016-9347-8