Skip to main content
Log in

Olpidiopsis porphyrae var. koreanae, an endemic endoparasite infecting cultivated Pyropia yezoensis in Korea

  • Published:
Journal of Applied Phycology Aims and scope Submit manuscript

Abstract

Oomycetes are one of the most serious pathogens that threaten global aquaculture industry, and they cause two out of three most common diseases in Pyropia farms. Recent study showed that Olpidiopsis disease occurring in Pyropia farms in Korea and Japan is caused by different endemic Olpidiopsis species, O. porphyrae in Japan, and O. pyropiae in Korea. From 3 years of epidemiological studies in Pyropia sea farms, we found an additional Olpidiopsis variety causing disease in Pyropia farms in Korea and named it O. porphyrae var. koreanae. It was a clearly different species from previously reported O. pyropiae in 18S rRNA gene sequence (91.0% of identity) and a different variety from Japanese O. porphyrae, which unlike Korean variety had four introns in18S rRNA gene. In our new strain, one more fifth intron was inserted between introns 2 and 3. The sequence similarity of introns ranged from 92.7 to 100%. The ultrastructure, infection process, and asexual life history of this new variety were similar to previously reported Olpidiopsis species, except for the size of zoospores. Phylogenetic analysis using 18S rRNA and cox genes showed that three Pyropia-infecting Olpidiopsis formed a group which had a loose affinity with the other marine Olpidiopsis spp.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Bhattacharya D, Reeb V, Simon DM, Lutzoni F (2005) Phylogenetic analyses suggest reverse splicing spread of group I introns in fungal ribosomal DNA. BMC Evol Biol 5:68

    Article  PubMed  PubMed Central  Google Scholar 

  • Choi Y-J, Beakes G, Glockling S, Kruse J, Nam B, Nigrelli L, Ploch S, Shin H-D, Shivas RG, Telle S, Voglmayr H, Thines M (2015) Towards a universal barcode of oomycetes—a comparison of the cox1 and cox2 loci. Mol Ecol Res 15:1275–1288

    Article  CAS  Google Scholar 

  • Fletcher K, Žuljevic A, Tsirigoti A, Antolic B, Katsaros C, Nikolic V, van West P, Küpper FC (2015) New record and phylogenetic affinities of the oomycete Olpidiopsis feldmanni infecting Asparagopsis sp. (Rhodophyta). Dis Aquat Org 117:45–57

    Article  PubMed  Google Scholar 

  • Gretz MR, Mccandless EL, Aronson JM, Sommerfeld MR (1983) The galactan sulphates of the conchocelis phases of Porphyra leucostricta and Bangia atropurpurea (Rhodophyta). J Exp Bot 34:705–711

    Article  CAS  Google Scholar 

  • Haugen P, Simon DM, Bhattacharya D (2005) The natural history of group I introns. Trends Genet 21:111–119

    Article  CAS  PubMed  Google Scholar 

  • Kim GH, Moon K-H, Kim J-Y, Shim J, Klochkova TA (2014) A revaluation of algal diseases in Korean Pyropia (Porphyra) sea farms and their economic impact. Algae 29:249–265

    Article  Google Scholar 

  • Klochkova TA, Shim JB, Hwang MS, Kim GH (2012) Host-parasite interactions and host species susceptibility of marine fungal parasite, Olpidiopsis sp., from Korea that infects red algae. J Appl Phycol 24:135–144

    Article  Google Scholar 

  • Klochkova TA, Jung S, Kim GH (2016a) Host range and salinity tolerance of Pythium porphyrae may indicate its terrestrial origin. J Appl Phycol. doi:10.1007/s10811-016-0947-8

  • Klochkova TA, Shin YJ, Moon K-H, Motomura T, Kim GH (2016b) New species of unicellular obligate parasite, Olpidiopsis pyropiae sp. nov., that plagues Pyropia sea farms in Korea. J Appl Phycol 28:73–83

  • Logsdon JM, Stoltzfus JA, Doolittle WF (1998) Molecular evolution: recent cases of spliceosomal intron gain? Curr Biol 8:R560–R563

    Article  CAS  PubMed  Google Scholar 

  • Lynch M (2002) Intron evolution as a population-genetic process. PNAS 99:6118–6123

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Machouart M, Gueidan C, Khemisti A, Dulongcourty R, Sudhadham M, De Hoog GS (2011) Use of ribosomal introns as new markers of genetic diversity in Exophiala dermatitidis. Fung Biol 115:1038–1050

    Article  CAS  Google Scholar 

  • Mukai LS, Craigie JS, Brown RG (1981) Chemical composition and structure of the cell walls of the conchocelis and thallus phases of Porphyra tenera (Rhodophyceae). J Phycol 17:192–198

    Article  CAS  Google Scholar 

  • Nagasato C, Motomura T (2002) Ultrastructural study on mitosis and cytokinesis in Scytosiphon lomentaria zygotes (Scytosiphonales, Phaeophyceae) by freeze-substitution. Protoplasma 219:140–149

    Article  CAS  PubMed  Google Scholar 

  • Robideau GP, De Cock AW, Coffey MD, Voglmayr H, Brouwer H, Bala K, Chitty DW, Désaulniers N, Eggertson QA, Gachon CM, Hu CH, Küpper FC, Rintoul TL, Sarhan E, Verstappen EC, Zhang Y, Bonants PJ, Ristaino JB, Lévesque CA (2011) DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Mol Ecol Resour 11:1002–1011

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ronquist F, Huelsenbeck JP (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754–755

    Article  PubMed  Google Scholar 

  • Sekimoto S, Hatai K, Honda D (2007) Molecular phylogeny of an unidentified Haliphthoros-like marine oomycete and Haliphthoros milfordensis inferred from nuclear-encoded small- and large-subunit rRNA genes and mitochondrial-encoded cox2 gene. Mycoscience 48:212–221

    Article  CAS  Google Scholar 

  • Sekimoto S, Yokoo K, Kawamura Y, Honda D (2008) Taxonomy, molecular phylogeny, and ultrastructural morphology of Olpidiopsis porphyrae sp. nov. (oomycetes, Straminipiles), a unicellular obligate endoparasite of Bangia and Porphyra spp. (Bangiales, Rhodophyta). Mycol Res 112:361–374

    Article  CAS  PubMed  Google Scholar 

  • Sekimoto S, Klochkova TA, West JA, Beakes GW, Honda D (2009) Olpidiopsis bostrychiae sp. nov.: an endoparasitic oomycete that infects Bostrychia and other red algae (Rhodophyta). Phycologia 48:460–472

    Article  Google Scholar 

  • Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312–1313

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ueki C, Nagasato C, Motomura T, Saga N (2008) Reexamination of the pit plugs and the characteristic membranous structures in Porphyra yezoensis (Bangiales, Rhodophyta). Phycologia 47:5–11

    Article  Google Scholar 

  • Usov AI (2011) Polysaccharides of the red algae. Adv Carbohydr Chem Biochem 65:115–217

    Article  CAS  PubMed  Google Scholar 

  • West JA, Klochkova TA, Kim GH, Loiseaux-de Goër S (2006) Olpidiopsis sp., an oomycete from Madagascar that infects Bostrychia and other red algae: host species susceptibility. Phycol Res 54:72–85

    Article  Google Scholar 

  • Xu C, Wang C, Sun X, Zhang R, Gleason ML, Eiji T, Sun G (2013) Multiple group I introns in the small-subunit rDNA of Botryosphaeria dothidea: implication for intraspecific genetic diversity. PLoS One 8(7):e67808

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgements

This work was supported by a National Research Foundation of Korea Grant (NRF-2015M1A5A1041804) funded to GHK. This research was also supported by Golden Seed Project, Ministry of Agriculture, Food and Rural Affairs funded by Ministry of Oceans and Fisheries, Korea.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Gwang Hoon Kim.

Electronic supplementary material

ESM 1

(PDF 220 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Kwak, M.S., Klochkova, T.A., Jeong, S. et al. Olpidiopsis porphyrae var. koreanae, an endemic endoparasite infecting cultivated Pyropia yezoensis in Korea. J Appl Phycol 29, 2003–2012 (2017). https://doi.org/10.1007/s10811-017-1109-3

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10811-017-1109-3

Keywords

Navigation