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Assessing plant health in a network of experiments on hardy winter wheat varieties in France: patterns of disease-climate associations

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Abstract

A data set generated by a multi-year (2003–2010) and multi-site network of experiments on winter wheat varieties grown at different levels of crop management is analysed in order to assess the importance of climate on the variability of wheat health. Wheat health is represented by the multiple pathosystem involving five components: leaf rust, yellow rust, fusarium head blight, powdery mildew, and septoria tritici blotch. An overall framework of associations between multiple diseases and climate variables is developed. This framework involves disease levels in a binary form (i.e. epidemic vs. non-epidemic) and synthesis variables accounting for climate over spring and early summer. The multiple disease-climate pattern of associations of this framework conforms to disease-specific knowledge of climate effects on the components of the pathosystem. It also concurs with a (climate-based) risk factor approach to wheat diseases. This report emphasizes the value of large scale data in crop health assessment and the usefulness of a risk factor approach for both tactical and strategic decisions for crop health management.

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References

  • Ali, S., Gladieux, P., Leconte, M., Gautier, A., Justesen, A. F., Hovmoller, M. S., Enjalbert, J. & de Vallavieille-Pope, C. (2014). Origin, migration routes and worldwide population genetic structure of the wheat yellow rust pathogen Puccinia striiformis f.sp. tritici. PLoS Pathogens, 10 doi:10.1371/journal.ppat.1003903

  • Benzécri, J. P. (1973). L’Analyse des Données, Tome2 (632 p). Paris: L’Analyse des Correspondances. Dunod.

  • Bockus, W. W., Bowden, R. L., Hunger, R. M., Morrill, W.;. L., Murray, T. D., & Smiley, R. W. (2010). Compendium of Wheat Diseases and Pests (3rd ed.). APS Press St Paul MN.

  • Campbell, L. C., & Madden, L. V. (1990). Introduction to Plant Disease Epidemiology. New York: John Wiley & Sons.

    Google Scholar 

  • Clifford, B. C., & Harris, R. G. (1981). Controlled environment studies of the epidemic potential of Puccinia recondita f. sp. tritici on wheat in Britain. Transactions of the British Mycological Society, 77, 351–358.

    Article  Google Scholar 

  • Coakley, S. M., & Line, R. F. (1981). Quantitative relationships between climatic variables and stripe rust epidemics on winter wheat. Phytopathology, 71, 461–467.

    Article  Google Scholar 

  • Daamen, R. A. (1990). Surveys of cereal diseases and pests in the Netherlands. 1. Weather and winter wheat cropping during 1974–1986. Netherlands Journal of Plant Pathology, 96, 227–236.

    Article  Google Scholar 

  • Daamen, R. A., & Stol, W. (1990). Surveys of cereal diseases and pests in the Netherlands. 2. Stem-base diseases of winter wheat. Netherlands Journal of Plant Pathology, 96, 251–260.

    Article  Google Scholar 

  • Daamen, R. A., & Stol, W. (1992). Surveys of cereal diseases and pests in the Netherlands. 5. Occurrence of Septoria spp. in winter wheat. Netherlands Journal of Plant Pathology, 98, 369–376.

    Article  Google Scholar 

  • Daamen, R. A., & Stol, W. (1994). Surveys of cereal diseases and pests in the Netherlands. 6. Occurrence of insect pests in winter wheat. Netherlands Journal of Plant Pathology, 99(Suppl. 3), 51–56.

    Google Scholar 

  • Daamen, R. A., Langerak, C. J., & Stol, W. (1991). Surveys of cereal diseases and pests in the Netherlands. 3. Monographella nivalis and Fusarium spp. in winter wheat fields and seed lots. Netherlands Journal of Plant Pathology, 97, 105–114.

    Article  Google Scholar 

  • Daamen, R. A., Stubbs, R. W., & Stol, W. (1992). Surveys of cereal diseases and pests in the Netherlands. 4. Occurrence of powdery mildew and rusts in winter wheat. Netherlands Journal of Plant Pathology, 98, 301–312.

    Article  Google Scholar 

  • Vallavieille-Pope, C. de ; Huber, L., Leconte, M. & Goyeau, H. (1995). Comparative effects of temperature and interrupted wet periods on germination, penetration and infection of Puccinia recondita f.sp. tritici and P. striiformis on wheat seedlings. Phytopathology, 85, 409–415.

  • Döring, T. F., Pautasso, M., Finckh, M. R., & Wolfe, M. (2012). Concepts of plant health – reviewing and challenging the foundations of plant protection. Plant Pathology, 61, 1–15.

    Article  Google Scholar 

  • Durand, Y., Giraud, G., Laternser, M., Etchevers, P., Mérindol, L., & Lesaffre, B. (2009). Reanalysis of 47 years of climate in the French alps (1958–2005): Climatology and trends for snow cover. Journal of Applied Meteorology and Climatology, 48, 2487–2512.

    Article  Google Scholar 

  • Eversmeyer, M. G., & Kramer, C. L. (1998). Models of early spring survival of wheat leaf rust in the central Great Plains. Plant Disease, 82, 987–991.

    Article  Google Scholar 

  • Eversmeyer, M. G., Kramer, C. L., & Browder, L. E. (1980). Effect of temperature and host: parasite combination on the latent period of Puccinia recondita in seedling wheat plants. Phytopathology, 70, 938–941.

    Article  Google Scholar 

  • Gladders, P., Langton, S. D., Barrie, I. A., Hardwick, N. V., Taylor, M. C., & Paveley, N. D. (2007). The importance of weather and agronomic factors for the overwinter survival of yellow rust (Puccinia striiformis) and subsequent disease risk in commercial wheat crops in England. Annals of Applied Biology, 150(3), 371–382.

    Article  Google Scholar 

  • Greenacre, M. J. (1984). Theory and Applications of Correspondence Analysis. London: Academic Press.

    Google Scholar 

  • Hardwick, N. V., Jones, D. R., & Slough, J. E. (2001). Factors affecting diseases of winter wheat in England and Wales, 1989-98. Plant Pathology, 50, 453–462.

    Article  CAS  Google Scholar 

  • Harrell Jr., F. E. (2001). Regression Modeling Strategies: With Applications to Linear Models, Logistic Regression, and Survival Analysis. New York: Springer-Verlag.

    Book  Google Scholar 

  • Holmes, S. J. I., & Colhoun, J. (1974). Infection of wheat by Septoria nodorum and S. tritici in relation to plant age, air temperature and relative humidity. Transactions of the British Mycological Society, 63, 329–338.

    Article  Google Scholar 

  • Hovmøller, M. S. (2001). Disease severity and pathotype dynamics of Puccinia striiformis f.sp. tritici in Denmark. Plant Pathology, 50, 181–189.

    Article  Google Scholar 

  • Hovmøller, M. S., Sorensen, C. K., Walter, S., & Justesen, A. F. (2011). Diversity of Puccinia striiformis on cereals and grasses. Annual Review of Phytopathology, 49, 197–217.

    Article  PubMed  Google Scholar 

  • Jennings, P., Coates, M. E., Walsh, K., Turner, J. A., & Nicholson, P. (2004). Determination of deoxynivalenol- and nivalenol-producing chemotypes of Fusarium graminearum isolated from wheat crops in England and Wales. Plant Pathology, 53, 643–652.

    Article  CAS  Google Scholar 

  • King, J. E. (1977). Surveys of diseases of winter wheat in England and Wales, 1970-1975. Plant Pathology, 26, 8–20.

    Article  Google Scholar 

  • Kranz, J. (1988). Measuring plant disease. In J. Kranz & J. Rotem (Eds.), Experimental Techniques in Plant Disease Epidemiology. Heidelberg, New York: Springer Verlag. Berlin.

    Chapter  Google Scholar 

  • Kriss, A. B., Paul, P. A., & Madden, L. V. (2010). Relationship between yearly fluctuations in Fusarium head blight intensity and environmental variables: a window-pane analysis. Phytopathology, 100, 784–797.

    Article  CAS  PubMed  Google Scholar 

  • Lim, S. S., Vos, T., Flaxman, A. D., Danaei, G., et al. (2012). A comparative risk assessment of burden of disease and injury attributable to 67 risk factors and risk factor clusters in 21 regions, 1990–2010: a systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380, 2224–2260.

    Article  PubMed  PubMed Central  Google Scholar 

  • Madden, L. V., Hughes, G., & Van den Bosch, F. (2007). The Study of Plant Disease Epidemics. St Paul, Minnesota, USA: The American Phytopathology Press.

    Google Scholar 

  • Milus, E. A., Kristensen, K., & Hovmøller, M. S. (2009). Evidence for increased aggressiveness in a recent widespread strain of Puccinia striiformis f. sp. tritici causing stripe rust of wheat. Phytopathology, 99, 89–94.

    Article  PubMed  Google Scholar 

  • Nielsen, L. K., Jensen, J. D., Nielsen, G. C., Jensen, J. E., Spliid, N. H., Thomsen, I. K., et al. (2011). Fusarium head blight of cereals in Denmark: Species complex and related mycotoxins. Phytopathology, 101, 960–969.

    Article  CAS  PubMed  Google Scholar 

  • Parry, D. W., Jenkinson, P., & McLeod, L. (1995). Fusarium ear blight (scab) in small grain cereals-a review. Plant Pathology, 44, 207–238.

    Article  Google Scholar 

  • Paulitz, T. C. (1996). Diurnal release of ascospores by Gibberella zeae in inoculated wheat plots. Plant Disease, 80, 674–678.

    Article  Google Scholar 

  • Polley, R. W., & Thomas, M. R. (1991). Surveys of diseases of winter wheat in England and Wales, 1976–1988. The Annals of Applied Biology, 119, 1–20.

    Article  Google Scholar 

  • Quintana-Seguí, P., Le Moigne, P., Durand, Y., Martin, E., Habets, F., Baillon, M., et al. (2008). Analysis of Near-Surface Atmospheric Variables: Validation of the SAFRAN Analysis over France. Journal of Applied Meteorology and Climatology, 47, 92–107.

    Article  Google Scholar 

  • Rapilly, F. (1979). Yellow rust epidemiology. Annual Review of Phytopathology, 17, 59–73.

    Article  Google Scholar 

  • Roelfs, A. P., & Bushnell, W. R. (Eds.) (1985). The Cereal rusts. Vol. 2: The Diseases, Their Distribution, Epidemiology, and Control. Orlando: Eds. Academic Press.

    Google Scholar 

  • Rossi, V., & Giosuè, S. (2003). A dynamic simulation model for powdery mildew epidemics on winter wheat. OEPP Bulletin, 33, 389–396.

    Article  Google Scholar 

  • Savary, S. (2014). The roots of crop health: cropping practices and disease management. Food Security, 6, 819–831.

    Article  Google Scholar 

  • Savary, S., Madden, L. V., Zadoks, J. C., & Klein-Gebbinck, H. W. (1995). Use of categorical information and correspondence analysis in plant disease epidemiology. Advances in Botanical Research incorporating Advances in Plant Pathology, 21, 213–240.

    Article  Google Scholar 

  • Savary, S., Mila, A., Willocquet, L., Esker, P. D., Carisse, O., & McRoberts, N. (2011). Risk factors for crop health under global change and agricultural shifts: A framework of analyses using rice in tropical and subtropical Asia as a model. Phytopathology, 101, 696–709.

    Article  CAS  PubMed  Google Scholar 

  • Savary, S., Jouanin, C., Félix, I., Gourdain, E., Piraux, F., Willocquet, L., et al. (2016). Assessing plant health in a network of experiments on hardy winter wheat varieties in France: multivariate and risk factor analyses. European Journal of Plant Pathology. doi:10.1007/s10658-016-0955-1.

  • Shah, D. A., Molineros, J. E., Paul, P. A., Willyerd, K. T., Madden, L. V., & De Wolf, E. D. (2013). Predicting Fusarium head blight epidemics with weather-driven pre- and post-anthesis logistic regression models. Phytopathology, 103, 906–919.

    Article  CAS  PubMed  Google Scholar 

  • Shah, D. A., De Wolf, E. D., Paul, P. A., & Madden, L. V. (2014). Predicting Fusarium head blight epidemics with boosted regression trees. Phytopathology, 104, 702–714.

    Article  CAS  PubMed  Google Scholar 

  • Shaner, G., & Finney, R. E. (1976). Weather and epidemics of Septoria leaf blotch of wheat. Phytopathology, 66, 781–785.

    Article  Google Scholar 

  • Sørensen, C. K., Hovmøller, M. S., Leconte, M., Dedryver, F., & de Vallavieille-Pope, C. (2014). New races of Puccinia striiformis found in Europe reveal race specificity of long-term effective adult plant resistance in wheat. Phytopathology, 104, 1042–1051.

    Article  PubMed  Google Scholar 

  • Steinberg, D., & Colla, P. (2007). Logistic regression, Pages 2–92 in. Statistics III, SYSTAT 12. San Jose, CA: SYSTAT Software, Inc..

    Google Scholar 

  • Suffert, F., Sache, I., & Lannou, C. (2011). Early stages of septoria tritici blotch epidemics of winter wheat: build-up, overseasoning, and release of primary inoculum. Plant Pathology, 60, 166–177.

    Article  Google Scholar 

  • Te Beest, D. E., Paveley, N. D., Shaw, M. W., & Van den Bosch, F. (2008). Disease-weather relationships for powdery mildew and yellow rust on winter wheat. Phytopathology, 98, 609–617.

    Article  Google Scholar 

  • Te Beest, D. E., Shaw, M. W., Pietravalle, S., & Van den Bosch, F. (2009). A predictive model for early-warning of Septoria leaf blotch on winter wheat. European Journal of Plant Pathology, 124, 413–425.

    Article  Google Scholar 

  • Tollenaar, H. (1985). Uredospore germination and development of some cereal rusts from South-central Chile at constant temperatures. Phytopathologische Zeitschrift, 114, 118–125.

    Article  Google Scholar 

  • Tollenaar, H., & Houston, B. R. (1967). A study of the epidemiology of stripe rust (Puccinia striiformis) in California. Canadian Journal of Botany, 45, 291–307.

    Article  Google Scholar 

  • Tomerlin, J. R., Eversmeyer, M. G., Kramer, C. L., & Browder, L. E. (1983). Temperature and host effects on latent and infectious periods and on urediniospore production of Puccinia recondita f.sp. tritici. Phytopathology, 73, 414–419.

    Article  Google Scholar 

  • Wainshilbaum, S. J., & Lipps, P. E. (1991). Effect of temperature and growth stage of wheat on development of leaf and glume blotch caused by Septoria tritici and S. nodorum. Plant Disease, 75, 993–998.

    Article  Google Scholar 

  • Wiik, L., & Ewaldz, T. (2009). Impact of temperature and precipitation on plant diseases of winter wheat in Southern Sweden, 1983-2007. Crop Protection, 28, 952–962.

    Article  Google Scholar 

  • Zadoks, J. C., Chang, T. T., & Konzak, C. F. (1974). A decimal code for the growth stages of cereals. Weed Research, 14, 415–421.

    Article  Google Scholar 

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Acknowledgments

This research was supported partly by PEBiP – “Analyse stratégique des relations Pratiques - Environnement - Bioagresseurs - Pertes de récoltes”, funded by the French ministry of agriculture and fisheries. We also thank the Blé Rustiques Network (INRA, ARVALIS, Chambres d’Agriculture, and CIVAM) for making data available.

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Savary, S., Jouanin, C., Félix, I. et al. Assessing plant health in a network of experiments on hardy winter wheat varieties in France: patterns of disease-climate associations. Eur J Plant Pathol 146, 741–755 (2016). https://doi.org/10.1007/s10658-016-0954-2

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