Skip to main content
Log in

Senna leaf curl virus: a novel begomovirus identified in Senna occidentalis

  • Annotated Sequence Record
  • Published:
Archives of Virology Aims and scope Submit manuscript

Abstract

Begomoviruses are whitefly-transmitted, single-stranded DNA viruses that infect a variety of cultivated (crop) and non-cultivated (weed) plants. The present study identified a novel begomovirus and satellites (alpha- and betasatellite) in Senna occidentalis (syn. Cassia occidentalis) showing leaf curl symptoms. The begomovirus shared a maximum sequence identity of 88.6 % with french bean leaf curl virus (JQ866297), whereas the alphasatellite and the betasatellite shared identities of 98 % and 90 % with ageratum yellow vein India alphasatellite (LK054802) and papaya leaf curl betasatellite (HM143906), respectively. No other begomovirus or satellites were detected in the suspected plants. We propose to name the virus “senna leaf curl virus” (SenLCuV).

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  1. Adams MJ, King AMQ, Carstens EB (2013) Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013). Arch Virol 158:2023–2030. doi:10.1007/s00705-013-1688-5

    Article  CAS  PubMed  Google Scholar 

  2. Brown JK, Zerbini FM, Navas-Castillo J et al (2015) Revision of Begomovirus taxonomy based on pairwise sequence comparisons. Arch Virol 160:1593–1619. doi:10.1007/s00705-015-2398-y

    Article  CAS  PubMed  Google Scholar 

  3. Hema M, Sreenivasulu P, Patil BL et al (2014) Tropical food legumes. Virus diseases of economic importance and their control. Adv Virus Res 90:431–505. doi:10.1016/B978-0-12-801246-8.00009-3

    Article  PubMed  Google Scholar 

  4. Alabi OJ, Ogbe FO, Bandyopadhyay R et al (2008) Alternate hosts of African cassava mosaic virus and East African cassava mosaic Cameroon virus in Nigeria. Arch Virol 153:1743–1747. doi:10.1007/s00705-008-0169-8

    Article  CAS  PubMed  Google Scholar 

  5. Ilyas M, Qazi J, Mansoor S, Briddon RW (2009) Molecular characterisation and infectivity of a “Legumovirus” (genus Begomovirus: family Geminiviridae) infecting the leguminous weed Rhynchosia minima in Pakistan. Virus Res 145:279–284. doi:10.1016/j.virusres.2009.07.018

    Article  CAS  PubMed  Google Scholar 

  6. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem bull 19:11–15

    Google Scholar 

  7. Muhire BM, Varsani A, Martin DP (2014) SDT: a virus classification tool based on pairwise sequence alignment and identity calculation. PLoS One 9(9):e108277. doi:10.1371/journal.pone.0108277

    Article  PubMed  PubMed Central  Google Scholar 

  8. Tamura K, Stecher G, Peterson D et al (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729. doi:10.1093/molbev/mst197

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Rey MEC, Ndunguru J, Berrie LC et al (2012) Diversity of dicotyledenous-infecting geminiviruses and their associated DNA molecules in Southern Africa, including the South-west Indian Ocean Islands. Viruses 4:1753–1791. doi:10.3390/v4091753

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Martin DP, Murrell B, Golden M et al (2015) RDP4: Detection and analysis of recombination patterns in virus genomes. Virus Evol 1(1):vev003. doi:10.1093/ve/vev003

    Article  Google Scholar 

  11. Kumar J, Kumar A, Roy JK et al (2010) Identification and molecular characterization of begomovirus and associated satellite DNA molecules infecting Cyamopsis tetragonoloba. Virus Genes 41:118–125. doi:10.1007/s11262-010-0482-7

    Article  CAS  PubMed  Google Scholar 

  12. Briddon RW, Stanley J (2006) Subviral agents associated with plant single-stranded DNA viruses. Virology 344:198–210. doi:10.1016/j.virol.2005.09.042

    Article  CAS  PubMed  Google Scholar 

  13. Nawaz-ul-Rehman MS, Mansoor S, Briddon RW, Fauquet CM (2009) Maintenance of an old world betasatellite by a new world helper begomovirus and possible rapid adaptation of the betasatellite. J Virol 83:9347–9355. doi:10.1128/JVI.00795-09

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Kumar J, Kumar J, Singh SP, Tuli R (2014) Association of satellites with a mastrevirus in natural infection: complexity of Wheat dwarf India virus disease. J Virol 88:7093–7104. doi:10.1128/JVI.02911-13

    Article  PubMed  PubMed Central  Google Scholar 

  15. Yadav JP, Arya V, Yadav S et al (2010) Cassia occidentalis L.: a review on its ethnobotany, phytochemical and pharmacological profile. Fitoterapia 81:223–230. doi:10.1016/j.fitote.2009.09.008

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

The authors are grateful to the Council of Scientific and Industrial Research and Department of Biotechnology, Government of India, for fellowships and funds, and to the Department of Science and Technology for JC Bose Fellowship to RT.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Jitendra Kumar or Rakesh Tuli.

Ethics declarations

Conflict of interest

The authors declare that they have no conflict of interest.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Kumar, J., Alok, A., Kumar, J. et al. Senna leaf curl virus: a novel begomovirus identified in Senna occidentalis . Arch Virol 161, 2609–2612 (2016). https://doi.org/10.1007/s00705-016-2931-7

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00705-016-2931-7

Keywords

Navigation