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A novel plant-associated thermotolerant alkaliphilic methylotroph of the genusParacoccus

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Abstract

Strain GB isolated from the maize rhizosphere is a gram-negative, aerobic, non-spore-forming, nonpigmented, nonmotile, chemolithotrophic, facultatively methylotrophic bacterium. Cells are cocci or short rods. The strain does not require vitamins. Optimum growth in a medium with methanol occurs at 38–42°C at pH 8.0–9.2. The doubling time is 12 h. In addition to methanol, the bacterium can grow on methylamine, dimethylformamide, acetone, thiosulfate + NaHCO3, and in an atmosphere of H2 + CO2 + O2. Methanol and methylamine are oxidized by the respective dehydrogenases to CO2 via formaldehyde and formate, respectively. The CO2 produced is assimilated via the ribulose bisphosphate pathway. Fatty acids are dominated by cyclopropanoic (58–61%), palmitic (24–26%), and octadecanoic (8–9%) acids. The main phospholipids are phosphatidylglycerol, phosphatidylethanolamine, and phosphatidylcholine. The major ubiquinone is Q10. The bacterial genome contains genes controlling the synthesis and secretion of cytokinins. The culture liquid exhibits cytokinin activity. The G+C content of DNA is 62.5 mol %, as determined from the DNA thermal denaturation temperature Tm). Strain GB shows a moderate degree of DNA-DNA homology (<40%) with the type representatives of the genusParacoccus. Based on the data obtained, the bacterium was classified as a new species of this genus, namedP. kondratievae.

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References

  1. Fall, R., Cycling of Methanol between Plants, Methylotrophs and the Atmosphere,Microbial Growth on C 1-Compounds, Lidstrom, M.E. and Tabita, F.R., Eds., Dordrecht: Kluwer, 1996, pp. 343–350.

    Google Scholar 

  2. Corpe, W.A. and Rheem, S., Ecology of the Methylotrophic Bacteria on Living Leaf Surfaces,FEMS Microbiol. Ecol., 1989, vol. 62, no. 4, pp. 243–250.

    Article  CAS  Google Scholar 

  3. Holland, M.A.,Methylobacterium and Plants,Rec. Res. Develop. Plant Physiol., 1997, vol. 1, no. 1, pp. 207–213.

    Google Scholar 

  4. Long, R., Morris, R., and Polacco, J., Cytokinin Production by Plant-Associated Methylotrophic Bacteria,Am. Soc. Plant Physiol., 1997, Abstr. 1168.

  5. Shepelyakovskaya, A.O., Doronina, N.V., Laman, A.G., Brovko, F.A., and Trotsenko, Yu.A., New Data on the Ability of Aerobic Methylotrophic Bacteria to Synthesize Cytokinins,Dokl. Akad. Nauk, 1999, vol. 368, no. 4, pp. 555–557.

    CAS  Google Scholar 

  6. Urakami, T., Tamaoka, J., Suzuki, K.-L, and Komagata, K.,Paracoccus alcaliphilus sp. nov., an Alkaliphilic and Facultatively Methylotrophic Bacterium,Int. J. Syst. Bacteriol., 1989, vol. 39, no. 2, pp. 116–121.

    Google Scholar 

  7. Siller, H., Rainey, F.A., Stackebrandt, E., and Winter, J., Isolation and Characterization of a New Gram-Negative, Acetone-Degrading, Nitrate-Reducing Bacterium from Soil,Paracoccus solventivorans sp. nov.,Int. J. Syst. Bacteriol., 1996, vol. 46, no. 4, pp. 1125–1130.

    CAS  Google Scholar 

  8. Doronina, N.V., Trotsenko, Y.A., Krauzova, V.I., and Suzina, N.E.,Paracoccus methylutens sp. nov., a New Aerobic Facultatively Methylotrophic Bacterium Utilizing Dichloromethane,Syst. Appl. Microbiol., 1998, vol. 21, no. 2, pp. 230–236.

    CAS  Google Scholar 

  9. Marmur, J.A., A Procedure for the Isolation of Deoxyribonucleic Acid from Microorganisms,J. Mol Biol, 1961, vol. 3, no. 2, pp. 208–218.

    Article  CAS  Google Scholar 

  10. Owen, R.J. and Lapage, S.P., The Thermal Denaturation of Partly Purified Bacterial Deoxyribonucleic Acid and Its Taxonomic Applications,J. Appl. Bacteriol., 1976, vol. 41, no. 3, pp. 335–340.

    PubMed  CAS  Google Scholar 

  11. De Ley, J., Cattoir, H., and Reynaerts, A., The Quantitative Measurement of DNA Hybridization from Renaturation Rates,Eur. J. Biochem., 1970, vol. 12, no. 1, pp. 133–142.

    Article  PubMed  CAS  Google Scholar 

  12. Doronina, N.V., Govorukhina, N.I., Lysenko, A.M., and Trotsenko, Yu.A., The DNA-DNA Homology Analysis of Obligately Methylotrophic Bacteria,Mikrobiologiya, 1988, vol. 57, no. 4, pp. 629–633.

    CAS  Google Scholar 

  13. Barry, G.F., Rogers, S.G., Fraley, R.T., and Brand, L., Identification of a Cloned Cytokinin Biosynthetic Gene,Proc. Natl. Acad. Sci. USA, 1984, vol. 81, pp. 4776–4780.

    Article  PubMed  CAS  Google Scholar 

  14. Powell, G.K. and Morris, R.O., Nucleotide Sequence and Expression of aPseudomonas savantanoi Cytokinin Biosynthetic Gene Homology withAgrobacterium tumefaciens tmr andtzs Loci,Nucleic Acids Res., 1986, vol. 14, pp. 2555–2565.

    Article  PubMed  CAS  Google Scholar 

  15. Cizkova, R., Acidification Stress of Root Environments Related to Endogenous Cytokinins and Gibberellins in Oak Seedlings,Biol. Plantarum, 1990, vol. 32, no. 1, pp. 97–103.

    CAS  Google Scholar 

  16. Baalsrud, K. and Baalsrud, K.S., Studies onThiobacillus denitrificans, Arch. Mikrobiol., 1954, vol. 20, no. 1, pp. 34–62.

    Article  PubMed  CAS  Google Scholar 

  17. van Verseveld, H.W. and Stouthamer, A.H., The GenusParacoccus, The Prokaryotes. A Handbook on the Biology of Bacteria: Ecophysiology, Isolation, Identification, Applications, 2nd ed., Balow, A.et al., Eds., New York: Springer, 1992, vol. 3, pp. 2322–2334.

    Google Scholar 

  18. Urakami, T., Araki, H., Oyanagi, H., Suzuki, K.-I., and Komagata, K.,Paracoccus aminophilus sp. nov. andParacoccus aminovorans sp. nov., Which Utilize N,N-Dimethylformamide,Int. J. Syst. Bacteriol., 1990, vol. 40, no. 3, pp. 287–291.

    PubMed  CAS  Google Scholar 

  19. Ohara, M., Katayama, Y., Tsuzaki, M., Nakamoto, S., and Kuraishi, H.,Paracoccus kocurii sp. nov., a Tetramethylammonium Assimilating Bacterium,Int. J. Syst. Bacteriol., 1990, vol. 40, no. 3, pp. 292–296.

    PubMed  CAS  Google Scholar 

  20. Katayama, Y., Hiraishi, A., and Kuraishi, H.,Paracoccus thiocyanatus sp. nov., a New Species of Thiocyanate-utilizing Facultative Chemolithotroph, and Transfer ofThiobacillus versutus to the GenusParacoccus asParacoccus versutus comb. nov. with Emendation of the Genus,Microbiology, 1995, vol. 141, pp. 1469–1477.

    Article  PubMed  CAS  Google Scholar 

  21. Lipski, A., Reichert, K., Reuter, B., Spoer, C., and Altendorf, K., Identification of Bacterial Isolates from Biofilters asParacoccus alkenifer sp. nov. andParacoccus solventivorans with Emended Description ofParacoccus solventivorans, Int. J. Syst. Bacteriol., 1998, vol. 48, no. 2, pp. 529–536.

    PubMed  CAS  Google Scholar 

  22. Harker, M., Hirschberg, J., and Oren, A.,Paracoccus marcusii sp. nov., an Orange Gram-Negative Coccus,Int. J. Syst. Bacteriol., 1998, vol. 48, no. 2, pp. 543–548.

    PubMed  Google Scholar 

  23. Rainey, F.A., Kelly, D.P., Stackebrandt, E., Burghart, J., Hiraishi, A., Katayama, Y., and Wood, A.P., A Reevaluation of the Taxonomy ofParacoccus denitrificans and a Proposal for the CombinationParacoccus pantotrophus comb, nov.,Int. J. Syst. Bacteriol., 1999, vol. 49, no. 3, pp. 645–651.

    PubMed  Google Scholar 

  24. Tsubokura, A., Yoneda, H., and Mizuta, H.,Paracoccus carotinifaciens sp. nov., a New Aerobic Gram-Negative Astaxanthin-producing Bacterium,Int. J. Syst. Bacteriol., 1999, vol. 49, no. 1, pp. 277–282.

    Article  PubMed  CAS  Google Scholar 

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Doronina, N.V., Trotsenko, Y.A. A novel plant-associated thermotolerant alkaliphilic methylotroph of the genusParacoccus . Microbiology 69, 593–598 (2000). https://doi.org/10.1007/BF02756814

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