Abstract
Denitrification is critical for removal of reactive nitrogen (Nr) from ecosystems. However, measuring realistic, scalable rates and understanding the role of denitrification and other dissimilatory processes in watershed nitrogen (N) budgets remains a significant challenge in biogeochemistry. In this study, we focused on the stream reach and network scale in three Mid-Atlantic coastal plain watersheds. We applied open channel methods to measure biogenic N2 and N2O gas fluxes derived from both in-stream and terrestrial nitrogen processing. A large portion of biogenic N2 flux through streams (33–100 %, mean = 74 %) was a result of groundwater delivery of biogenic N2 with the remaining portion due to in-stream N2 production. In contrast, N2O was largely produced in-stream, with groundwater delivery contributing on average 12 % of the total biogenic N2O flux. We scaled these measurements across one stream network and compared them to hydrologic Nr export and net anthropogenic N inputs (NANI) to a 4.8 km2 watershed. The N budget revealed that, during the study period, the biogenic N2 flux through streams was comparable to the difference between NANI and hydrologic Nr export (i.e. the “missing” N). This study provides a methodological and conceptual framework for incorporating terrestrial and in-stream derived biogenic N gas fluxes into watershed N budgets and supports the hypothesis that denitrification is the primary fate of NANI that is not exported in streamflow.
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Baulch HM, Schiff SL, Maranger R, Dillon PJ (2011) Nitrogen enrichment and the emission of nitrous oxide from streams. Glob Biogeochem Cycles 25(4): GB4013
Baulch H, Venkiteswaran J, Dillon P, Maranger R (2010) Revisiting the application of open-channel estimates of denitrification. Limnol Oceanogr: Methods 8(5):202–215
Beaulieu JJ, Arango CP, Hamilton SK, Tank JL (2007) The production and emission of nitrous oxide from headwater streams in the Midwestern United States. Glob Change Biol 14(4):878–894
Beaulieu JJ, Tank JL, Hamilton SK, Wollheim WM, Hall RO, Mulholland PJ, Peterson BJ, Ashkenas LR, Cooper LW, Dahm CN (2011) Nitrous oxide emission from denitrification in stream and river networks. Proc Natl Acad Sci 108(1):214–219
Böhlke J, Denver J (1995) Combined use of groundwater dating, chemical, and isotopic analyses to resolve the history and fate of nitrate contamination in two agricultural watersheds, Atlantic coastal plain, Maryland. Water Resour Res 31(9):2319–2339
Burgin AJ, Hamilton SK (2007) Have we overemphasized the role of denitrification in aquatic ecosystems? A review of nitrate removal pathways. Front Ecol Environ 5(2):89–96
Cey BD, Hudson GB, Moran JE, Scanlon BR (2009) Evaluation of noble gas recharge temperatures in a shallow unconfined aquifer. Groundwater 47(5):646–659
Chapra SC, Di Toro DM (1991) Delta method for estimating primary production, respiration, and reaeration in streams. J Environ Eng-Asce 117(5):640–655
Colt J (1984) Computation of dissolved gas concentrations in water as functions of temperature, salinity, and pressure. In: American Fisheries Society special publication (USA)
Darling JM (1962) Maryland streamflow characteristics. Bull. 25. State of Maryland Board of Natural Resources, Department of Geology, Mines, and Water Resources
Diaz RJ (2001) Overview of hypoxia around the world. J Environ Qual 30(2):275–281
Diaz RJ, Rosenberg R (2008) Spreading dead zones and consequences for marine ecosystems. Science 321(5891):926–929
Duff JH, Triska FJ (1990) Denitrifications in sediments from the hyporheic zone adjacent to a small forested stream. Can J Fish Aquat Sci 47(6):1140–1147
Duncan JM, Groffman PM, Band LE (2013) Towards closing the watershed nitrogen budget: spatial and temporal scaling of denitrification. J Geophys Res 118(3):1105–1119
Dunkle S, Plummer L, Busenberg E, Phillips P, Denver J, Hamilton P, Michel R, Coplen T (1993) Chlorofluorocarbons (CCl3F and CCl2F2) as dating tools and hydrologic tracers in shallow groundwater of the Delmarva Peninsula, Atlantic Coastal Plain, United States. Water Resour Res 29(12):3837–3860
Ellins KK, Romanmas A, Lee R (1990) Using Rn-222 to examine groundwater surface discharge interaction in the Rio-Grande-De-Manati,Puerto-Rico. J Hydrol 115(1–4):319–341
Fisher TR, Benitez JA, Lee KY, Sutton AJ (2006) History of land cover change and biogeochemical impacts in the Choptank River basin in the mid-Atlantic region of the US. Int J Remote Sens 27(17):3683–3703
Fisher TR, Gustafson AB, Koskelo AI, Fox RJ, Kana TM, Beckert KA, Stone JP, Jordan TE, Staver KW, Sutton AJ, McCarty GW, Lang MW (2010) The Choptank basin in transition: Intensifying agricutlure, slow urbanization, and estuarine eutrophication. In: Kennish ML, Paerl HW (eds) Coastal Lagoons: critical habitats of environmental change. CRC Press, Boca Raton
Fortuin NP, Willemsen A (2005) Exsolution of nitrogen and argon by methanogenesis in Dutch ground water. J Hydrol 301(1):1–13
Foster P, Ramaswamy P, Artaxo P, Berntsen T, Betts R, Fahey DW, Haywood J, Lean J, Lowe DC, Myhre G, Nganga J, Prinn R, Raga G, Schultz M, Van Dorland R (2007) Changes in the atmospheric constituents and in radiative forcing. In: Climate Change 2007: the physical science bases. Contribution of working group I to the 4th assessment report of the IPCC. Cambridge University Press, Cambridge
Fox RJ, Fisher TR, Gustafson AB, Jordan TE, Kana TM, Lang MW (2014) Searching for the missing nitrogen: biogenic nitrogen gases in groundwater and streams. J Agric Sci 152:96–106
Garcia HE, Gordon LI (1992) Oxygen solubility in seawater: better fitting equations. Limnol Oceanogr 37(6):1307–1312
Garcia-Ruiz R, Pattinson S, Whitton B (1998) Denitrification and nitrous oxide production in sediments of the Wiske, a lowland eutrophic river. Sci Total Environ 210–211:307–320
Gardner J (2014) Denitrification, N2O emissions, and nutrient export in Maryland coastal plain streams (MS Thesis). University of Maryland
Genereux DP, Hemond HF, Mulholland PJ (1993) Use of radon-222 and calcium as tracers in a three-end-member mixing model for streamflow generation on the West Fork of Walker Branch Watershed. J Hydrol 142(1):167–211
Golterman HL (2004) The chemistry of phosphate and nitrogen compounds in sediments. Springer Science & Business Media, Dordrecht
Groffman PM, Altabet MA, Böhlke J, Butterbach-Bahl K, David MB, Firestone MK, Giblin AE, Kana TM, Nielsen LP, Voytek MA (2006) Methods for measuring denitrification: diverse approaches to a difficult problem. Ecol Appl 16(6):2091–2122
Gu C, Hornberger GM, Herman JS, Mills AL (2008) Influence of stream-groundwater interactions in the streambed sediments on NO3 − flux to a low-relief coastal stream. Water Resources Research 44(11)
Gu C, Anderson W, Maggi F (2012) Riparian biogeochemical hot moments induced by stream fluctuations. Water Resour Res 48(11):W09546
Hamilton PA, Denver JM, Phillips PJ, Shedlock RJ (1993) Water quality assessment of the Delmarva Peninsula, Delaware, Maryland, and Virginia: Effects of agricultural activities on, and distribution of, nitrate and other inorganics constituents in the surficial aquifer, vol 93-40. USGS
Hamme RC, Emerson SR (2004) The solubility of neon, nitrogen and argon in distilled water and seawater. Deep Sea Res Part I 51(11):1517–1528
Harrison JA, Matson PA, Fendorf SE (2005) Effects of a diel oxygen cycle on nitrogen transformations and greenhouse gas emissions in a eutrophied subtropical stream. Aquat Sci 67(3):308–315
Hasegawa K, Hanaki K, Matsuo T, Hidaka S (2000) Nitrous oxide from the agricultural water system contaminated with high nitrogen. Chemosphere-Glob Change Sci 2(3):335–345
Hemond HF, Duran AP (1989) Fluxes of N2O at the sediment-water and water-atmosphere boundaries of a nitrogen-rich river. Water Resour Res 25(5):839–846
Higgins TM, McCutchan JH, Lewis WM (2008) Nitrogen ebullition in a Colorado plains river. Biogeochemistry 89(3):367–377
Hiscock K, Bateman A, Mühlherr I, Fukada T, Dennis P (2003) Indirect emissions of nitrous oxide from regional aquifers in the United Kingdom. Environ Sci Technol 37(16):3507–3512
Holtgrieve GW, Schindler DE, Branch TA, A’mar ZT (2010) Simultaneous quantification of aquatic ecosystem metabolism and reaeration using a Bayesian statistical model of oxygen dynamics. Limnol Oceanogr 55(3):1047–1063
Hotchkiss E, Hall R Jr, Sponseller R, Butman D, Klaminder J, Laudon H, Rosvall M, Karlsson J (2015) Sources of and processes controlling CO2 emissions change with the size of streams and rivers. Nat Geosci 8(9):696–699
Howarth RW, Billen G, Swaney D, Townsend A, Jaworski N, Lajtha K, Downing J, Elmgren R, Caraco N, Jordan T (1996) Regional nitrogen budgets and riverine N & P fluxes for the drainages to the North Atlantic Ocean: Natural and human influences. In Nitrogen cycling in the North Atlantic Ocean and its watersheds. Biogeochemistry 35:75–139
Howarth R, Swaney D, Billen G, Garnier J, Hong B, Humborg C, Johnes P, Mörth C-M, Marino R (2012) Nitrogen fluxes from the landscape are controlled by net anthropogenic nitrogen inputs and by climate. Front Ecol Environ 10(1):37–43
IPCC (2006) 2006 IPCC Guidelines for National Greenhouse Gas Inventories, Prepared by the National. In Eggleston HS, Buendia L, Miwa K, Ngara T and Tanabe K (eds) Greenhouse Gas Inventories Programme, IGES, Japan
Jähne B, Heinz G, Dietrich W (1987) Measurement of the diffusion coefficients of sparingly soluble gases in water. J Geophys Res 92(C10):10767
Jordan TE, Weller DE (1996) Human contributions to terrestrial nitrogen flux. BioScience 46:655–664
Jordan TE, Correll DL, Weller DE (1997) Effects of agriculture on discharges of nutrients from coastal plain watersheds of Chesapeake Bay. J Environ Qual 26(3):836–848
Kana TM, Darkangelo C, Hunt MD, Oldham JB, Bennett GE, Cornwell JC (1994) Membrane inlet mass spectrometer for rapid high-precision determination of N2, O2, and Ar in environmental water samples. Anal Chem 66(23):4166–4170
Kemp W, Boynton W, Adolf J, Boesch D, Boicourt W, Brush G, Cornwell J, Fisher T, Glibert P, Hagy J (2005) Eutrophication of Chesapeake Bay: historical trends and ecological interactions. Mar Ecol Prog Ser 303(21):1–29
Knowles R (1982) Denitrification. Microbiol Rev 46(1):43
Kulkarni MV, Groffman PM, Yavitt JB (2008) Solving the global nitrogen problem: it’s a gas! Front Ecol Environ 6(4):199–206
Laursen AE, Seitzinger SP (2002) Measurement of denitrification in rivers: an integrated, whole reach approach. Hydrobiologia 485(1–3):67–81
Laursen AE, Seitzinger SP (2004) Diurnal patterns of denitrification, oxygen consumption and nitrous oxide production in rivers measured at the whole-reach scale. Freshw Biol 49(11):1448–1458
Laursen A, Seitzinger S (2005) Limitations to measuring riverine denitrification at the whole reach scale: effects of channel geometry, wind velocity, sampling interval, and temperature inputs of N2-enriched groundwater. Hydrobiologia 545(1):225–236
Leopold LB, Maddock T (1953) the hydraulic geometry of stream channels and some phyriographic implications: quantitative measurement of some of the hydraulic factors that help to determine the shape of natural stream channels: depth, width, velocity, and suspended load, and how they vary with discharge as simple power functions; Teir Interrelations are Described by the Term “hydraulic Geometry”. U.S. Government Printing Office
Marzolf ER, Mulholland PJ, Steinman AD (1994) Improvements to the diurnal upstream-downstream dissolved oxygen change technique for determining whole-stream metabolism in small streams. Can J Fish Aquat Sci 51(7):1591–1599
McClain ME, Boyer EW, Dent CL, Gergel SE, Grimm NB, Groffman PM, Hart SC, Harvey JW, Johnston CA, Mayorga E, McDowell WH, Pinay G (2003) Biogeochemical hot spots and hot moments at the interface of terrestrial and aquatic ecosystems. Ecosystems 6(4):301–312
McCutchan J, Lewis W (2008) Spatial and temporal patterns of denitrification in an effluent-dominated plains river. Internationale Vereinigung fur Theoretische und Angewandte Limnologie Verhandlungen 30(2):323
McCutchan JH, Saunders JF, Pribyl AL, Lewis WM (2003) Open-channel estimation of denitrification. Limnol Oceanogr Methods 1:74–81
McIsaac G, Hu X (2004) Net N input and riverine N export from Illinois agricultural watersheds with and without extensive tile drainage. Biogeochemistry 70(2):253–273
Mosier A, Kroeze C, Nevison C, Oenema O, Seitzinger S, Van Cleemput O (1998) Closing the global N2O budget: nitrous oxide emissions through the agricultural nitrogen cycle. Nutr Cycl Agroecosyst 52(2–3):225–248
Nixon SW (1995) Coastal marine eutrophication: a definition, social causes, and future concerns. Ophelia 41(1):199–219
Norton M, Fisher T (2000) The effects of forest on stream water quality in two coastal plain watersheds of the Chesapeake Bay. Ecol Eng 14(4):337–362
Nowicki BL (1994) The effect of temperature, oxygen, salinity, and nutrient enrichment on estuarine denitrification rates measured with a modified nitrogen gas flux technique. Estuar Coast Shelf Sci 38(2):137–156
Ocampo CJ, Oldham CE, Sivapalan M (2006) Nitrate attenuation in agricultural catchments: shifting balances between transport and reaction. Water Resour Res 42(1):W01408
Peng TH, Broecker WS, Mathieu GG, Li YH, Bainbridge AE (1979) Radon evasion rates in the Atlantic and Pacific oceans as determined during the Geosecs Program. J Geophys Res 84(C5):2471
Pfenning K, McMahon P (1997) Effect of nitrate, organic carbon, and temperature on potential denitrification rates in nitrate-rich riverbed sediments. J Hydrol 187(3):283–295
Piña-Ochoa E, Álvarez-Cobelas M (2006) Denitrification in aquatic environments: a cross-system analysis. Biogeochemistry 81(1):111–130
Pribyl AL, Mccutchan JH, Lewis WM, Saunders Iii JF (2005) Whole-system estimation of denitrification in a plains river: a comparison of two methods. Biogeochemistry 73(3):439–455
Ravishankara AR, Daniel JS, Portmann RW (2009) Nitrous oxide (N2O): the dominant ozone-depleting substance emitted in the 21st century. Science 326(5949):123–125
Raymond PA, Zappa CJ, Butman D, Bott TL, Potter J, Mulholland P, Laursen AE, McDowell WH, Newbold D (2012) Scaling the gas transfer velocity and hydraulic geometry in streams and small rivers. Limnol Oceanogr 2:41–53
Roley SS, Tank JL, Williams MA (2012) Hydrologic connectivity increases denitrification in the hyporheic zone and restored floodplains of an agricultural stream. J Geophys Res 117(G3):G00N04
Seitzinger SP (1988) Denitrification in freshwater and coastal marine ecosystems: ecological and geochemical significance. Limnol Oceanogr 33(4):702–724
Seitzinger SP, Kroeze C (1998) Global distribution of nitrous oxide production and N inputs in freshwater and coastal marine ecosystems. Global Biogeochem Cycles 12(1):93–113
Seitzinger S, Harrison JA, Böhlke J, Bouwman A, Lowrance R, Peterson B, Tobias C, Drecht GV (2006) Denitrification across landscapes and waterscapes: a synthesis. Ecol Appl 16(6):2064–2090
Shine KP, Fuglestvedt JS, Hailemariam K, Stuber N (2005) Alternatives to the global warming potential for comparing climate impacts of emissions of greenhouse gases. Clim Change 68(3):281–302
Smethie WM, Takahashi T, Chipman DW, Ledwell JR (1985) Gas exchange and CO2 flux in the tropical Atlantic Ocean determined from 222Rn and pCO2 measurements. J Geophys Res 90(C4):7005
Smith TE, Laursen AE, Deacon JR (2008) Nitrogen attenuation in the Connecticut River, northeastern USA; a comparison of mass balance and N2 production modeling approaches. Biogeochemistry 87(3):311–323
Stanford G, Dzienia S, Vander Pol RA (1975) Effect of temperature on denitrification rate in soils. Soil Sci Soc Am J 39(5):867–870
Stow CA, Walker JT, Cardoch L, Spence P, Geron C (2005) N2O emissions from streams in the Neuse river watershed, North Carolina. Environ Sci Technol 39(18):6999–7004
Ueda S, Ogura N, Yoshinari T (1993) Accumulation of nitrous oxide in aerobic groundwaters. Water Res 27(12):1787–1792
Van Breemen N, Boyer E, Goodale C, Jaworski N, Paustian K, Seitzinger S, Lajtha K, Mayer B, Van Dam D, Howarth R (2002) Where did all the nitrogen go? Fate of nitrogen inputs to large watersheds in the northeastern USA. Biogeochemistry 57(1):267–293
Vilain G, Garnier J, Tallec G, Tournebize J (2011) Indirect N2O emissions from shallow groundwater in an agricultural catchment (Seine Basin, France). Biogeochemistry 111(1–3):253–271
Wanninkhof R (1992) Relationship between wind speed and gas exchange over the ocean. J Geophys Res 97(C5):7373
Wanninkhof R, Mulholland P, Elwood J (1990) Gas exchange rates for a first-order stream determined with deliberate and natural tracers. Water Resour Res 26(7):1621–1630
Weiss R, Price B (1980) Nitrous oxide solubility in water and seawater. Mar Chem 8(4):347–359
Well R, Weymann D, Flessa H (2005) Recent research progress on the significance of aquatic systems for indirect agricultural N2O emissions. Environ Sci 2(2–3):143–151
Werner SF, Browne BA, Driscoll CT (2010) Three-dimensional spatial patterns of trace gas concentrations in baseflow-dominated agricultural streams: implications for surface–ground water interactions and biogeochemistry. Biogeochemistry 107(1–3):319–338
Weymann D, Well R, Flessa H, von der Heide C, Deurer M, Meyer K, Konrad C, Walther W (2008) Groundwater N2O emission factors of nitrate-contaminated aquifers as derived from denitrification progress and N2O accumulation. Biogeosciences 5(5):1215–1226
Weymann D, Well R, Heide C, Böttcher J, Flessa H, Duijnisveld WHM (2009) Recovery of groundwater N2O at the soil surface and its contribution to total N2O emissions. Nutr Cycl Agroecosyst 85(3):299–312
Wilson G, Andrews J, Bath A (1990) Dissolved gas evidence for denitrification in the Lincolnshire Limestone groundwaters, eastern England. J Hydrol 113(1):51–60
Yan W, Laursen AE, Wang F, Sun P, Seitzinger SP (2004) Measurement of denitrification in the Changjiang River. Environ Chem 1(2):95
Acknowledgments
We thank the members of the Fisher lab group (Anne Gustafson, Rebecca Fox, Dana Bunnell-Young, Keota Silaphone, and Lindsay Tempison) and Todd Kana at the Horn Point Laboratory for their support. The following people from the Jordan lab group at Smithsonian Environmental Research Center provided field and lab assistance: Joe Miklas, Jake Wilhelm, and Carey Pelc. We thank Keith Eshleman for comments that led to the improvement of the manuscript. Funding sources include NSF (DEB# 0919181, DEB#0919141, DEB #1252923), Maryland Water Resources Research Center, Izaak Walton League-Midshore Chapter, and a Horn Point Laboratory Graduate Student Fellowship.
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Gardner, J.R., Fisher, T.R., Jordan, T.E. et al. Balancing watershed nitrogen budgets: accounting for biogenic gases in streams. Biogeochemistry 127, 231–253 (2016). https://doi.org/10.1007/s10533-015-0177-1
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DOI: https://doi.org/10.1007/s10533-015-0177-1