Skip to main content
Log in

Ala45Thr polymorphism of the NEUROD1 gene and diabetes susceptibility: a meta-analysis

  • Original Investigation
  • Published:
Human Genetics Aims and scope Submit manuscript

Abstract

A meta-analysis assessed whether the Ala45Thr polymorphism of the neurogenic differentiation 1 (NEUROD1) gene is associated with increased risk of diabetes mellitus type 1 (T1D) or type 2 (T2D). Fourteen case-control studies were analyzed, including genotype data on 3,057 patients with diabetes (T1D n=1,213, T2D n=1,844) and 2,446 controls. Overall and race-specific summary odds ratios (ORs) were obtained with fixed and random effects models. The Thr allele did not significantly increase the overall risk for T1D (OR 1.27 [0.94–1.71], P=0.12) or T2D (OR 1.07 [0.90–1.28], P=0.46). The Thr allele conferred increased susceptibility in subjects of Asian racial descent to T1D (OR 1.88 [1.10–3.21], P=0.020), but not to T2D (OR 1.08 [0.74–1.56], P=0.70). There was no association in subjects of European descent (OR 0.97 [0.76–1.23], P=0.80 for T1D; OR 1.03 [0.88–1.21], P=0.68 for T2D). Larger studies seemed to show more conservative estimates for the association with T1D (P=0.083). The Ala45Thr polymorphism of the NEUROD1 gene has no effect on susceptibility to T2D. It may however be a risk factor for susceptibility to T1D, in particular for subjects of Asian descent, although bias cannot be totally excluded.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  • Abiru N, Kawasaki E, Eguch K (2002) Current knowledge of Japanese type 1 diabetic syndrome. Diab Metab Res Rev 18:357–366

    CAS  Google Scholar 

  • American Diabetes Association (2004) Diagnosis and classification of diabetes mellitus. Diab Care 27 (Suppl 1):S5–S10

    Google Scholar 

  • Awata T, Inoue K, Inoue I, Abe T, Takino H, Kanazawa Y, Katayama S (2000) Lack of association of the Ala45Thr variant in the NeuroD/BETA2 with type 1 diabetes in Japanese. Diab Res Clin Pract 49:61–63

    CAS  Google Scholar 

  • Begg CB, Mazumdar M (1994) Operating characteristics of a rank correlation test for publication bias. Biometrics 50:1088–1101

    CAS  PubMed  Google Scholar 

  • Cinek O, Drevinek P, Summik Z, Bendlova B, Sedlakova P, Kolouskova S, Snajderova M, Vavrinec J (2003) Neuro D polymorphism Ala45Thr is associated with type 1 diabetes mellitus in Czech children. Diab Res Clin Pract 60:49–56

    CAS  Google Scholar 

  • Dupont S, Dina C, Han EH, Froguel P (1999a) Absence of replication in the French population of the association between NeuroD/BETA2-A45T polymorphism and type 1 diabetes. Diab Metab 25:516–517

    CAS  Google Scholar 

  • Dupont S, Vionnet N, Chevre JC, Gallina S, Dina C, Seino Y, Yamada Y, Froguel P (1999b) No evidence of linkage or diabetes-associated mutations in the transcription factors BETA2/NEUROD1 and PAX4 in type II diabetes in France. Diabetologia 42:480–484

    CAS  PubMed  Google Scholar 

  • Easterbrook PJ, Berlin JA, Gopalan R, Matthews DR (1991) Publication bias in clinical research. Lancet 337:867–872

    CAS  PubMed  Google Scholar 

  • Hansen L, Jensen JN, Urioste S, Petersen HV, Pociot F, Eiberg H, Kristiansen OP, Hansen T, Serup P, Nerup J, Pedersen O (2000) NeuroD/BETA2 gene variability and diabetes: no associations to late–onset type 2 diabetes but an A45 allele may represent a susceptibility marker for type 1 diabetes among Danes. Diabetes 49:876–878

    CAS  PubMed  Google Scholar 

  • Ioannidis JPA (1998) Effect of the statistical significance of results on the time to completion and publication of randomized efficacy trials. JAMA 279:281–286

    CAS  PubMed  Google Scholar 

  • Ioannidis JPA (2003) Genetic associations: false or true? Trends Mol Med 9:135–138

    PubMed  Google Scholar 

  • Ioannidis JP, Lau J (2001) Evolution of treatment effects over time: empirical insight from recursive cumulative metaanalyses. Proc Natl Acad Sci USA 98:831–836

    CAS  PubMed  Google Scholar 

  • Ioannidis JP, Ntzani EE, Trikalinos TA, Contopoulos-Ioannidis DG (2001) Replication validity of genetic association studies. Nat Genet 29:306–309

    Article  CAS  PubMed  Google Scholar 

  • Ioannidis JP, Trikalinos TA, Ntzani EE, Contopoulos-Ioannidis DG (2003) Genetic associations in large versus small studies: an empirical assessment. Lancet 361:567–571

    Article  PubMed  Google Scholar 

  • Iwata I, Nagafucki S, Nakashima H, Kondo S, Koga T, Yokogawa Y, Akashi T, Shibuya T, Umeno Y, Okeda T, Shibata S, Kono S, Yasunami M, Ohkubo H, Niho Y (1999) Association of polymorphism in the NeuroD/BETA2 gene with type 1 diabetes in the Japanese. Diabetes 48:416–419

    CAS  PubMed  Google Scholar 

  • Jackson A, Cassell P, North B, Vijayaraghavan S, Gelding S, Ramachandran A, Snehalatha C, Hitman G (2004) Polymorphic variations in the neurogenic differentiation-1, neurogenin-3, and hepatocyte nuclear factor-1alpha genes contribute to glucose intolerance in a south Indian population. Diabetes 53:2122–2125

    CAS  PubMed  Google Scholar 

  • Kanatsuka A, Tokuyama Y, Nozaki O, Matsui K, Egashira T (2002) β-Cell dysfunction in late-onset diabetic subjects carrying homozygous mutation in transcription factors NeuroD1 and PAX4. Metabolism 51:1161–1165

    CAS  PubMed  Google Scholar 

  • Lau J, Ioannidis JP, Schmid CH (1997) Quantitative synthesis in systematic reviews. Ann Intern Med 127:820–826

    CAS  PubMed  Google Scholar 

  • Malecki M, Jhala U, Antonellis A, Fields L, Doria A, Orban T, Saad M, Warram JH, Montminy M, Krolewski AS (1999) Mutations in NEUROD1 are associated with the development of type 2 diabetes mellitus. Nat Genet 23:323–328

    CAS  PubMed  Google Scholar 

  • Malecki MT, Cyganek K, Klupa T, Siezadzki J (2003a) The Ala45Thr polymorphism of BETA2/NeuroD1 gene and susceptibility to type 2 diabetes mellitus in a Polish population. Acta Diabetol 40:109–111

    CAS  PubMed  Google Scholar 

  • Malecki MT, Klupa T, Moczulski DK, Rogus JJ (2003b) The Ala45thr polymorphism of BETA2/NeuroD1 gene and susceptibility to type 1 diabetes mellitus in Caucasians. Exp Clin Endocrinol Diab 111:251–254

    CAS  Google Scholar 

  • Mockizuki M, Amemiya S, Kobayashi K, Ishihara T, Aya M, Kato K, Kasuga A, Nakazawa S (2002) The association of Ala45Thr polymorphism in NeuroD with child onset diabetes in Japanese. Diabetes Res Clin Pract 55:11–17

    Google Scholar 

  • Naya FJ, Huang HP, Qui Y, Mutoh H, DeMayo FJ, Leiter AB, Tsai MJ (1997) Diabetes detective pancreatic morphogenesis and abnormal enteroendocrine differentiation in BETA2/NeuroD-deficient mice. Genes Dev 11:2323–2334

    CAS  PubMed  Google Scholar 

  • Owerbach D, Naya FJ, Tsai MJ, Allande SV, Powell DR, Gabbay KH (1997) Analysis of candidate genes for susceptibility to type I diabetes: a case-control and family-association study of genes on chromosome 2q31–35. Diabetes 46:1069–1074

    CAS  PubMed  Google Scholar 

  • Park Y, Eisenbarth GS (2001) Genetic susceptibility factors of type 1 diabetes in Asians. Diab Metab Res Rev 17:2–11

    CAS  Google Scholar 

  • Trikalinos T, Ntzani E, Contopoulos-Ioannidis D, Ioannidis J (2004) Establishment of genetic associations for complex diseases is independent of early study findings. Eur J Hum Gene 12:762–769

    CAS  Google Scholar 

  • Vella A, Howson JM, Barratt BJ, Twells RC, Rance HE, Nutland S, Tuomilehto-Wolf E, Tuomilehto J, Undlien DE, Ronningen KS, Guja C, Ionescu-Tirgoviste C, Savage DA, Todd JA (2004) Lack of association of the Ala(45)Thr polymorphism and other common variants of the Neuro D gene with type 1 diabetes. Diabetes 53:1158–1161

    CAS  PubMed  Google Scholar 

  • Yamada S, Motohashi Y, Yanakawa T, Maruyama T, Kasuga A, Hirose H, Matsubara K, Shimada A, Saruta T (2001) NeuroD/BETA2 gene GA polymorphism may affect onset pattern of type 1 diabetes in Japanese. Diab Care 24:1438–1441

    CAS  Google Scholar 

  • Ye I, Xu Y, Zhu Y, Fan Y, Deng H, Zhang J (2002) Association of polymorphism in neurogenic differentiation factor 1 gene with type 2 diabetes. Zhongua Yi Xue Yi Chuan Xue Za Zhi 19:484–487

    CAS  Google Scholar 

Download references

Acknowledgments

We are thankful to Dr. David Owerbach and Dr. Lars Hansen for providing us with additional data from their studies.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to John P. A. Ioannidis.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kavvoura, F.K., Ioannidis, J.P.A. Ala45Thr polymorphism of the NEUROD1 gene and diabetes susceptibility: a meta-analysis. Hum Genet 116, 192–199 (2005). https://doi.org/10.1007/s00439-004-1224-5

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00439-004-1224-5

Keywords

Navigation