Skip to main content
Log in

Localization of quantitative trait loci (QTL) for agronomic important characters by the use of a RFLP map in barley (Hordeum vulgare L.)

  • Published:
Theoretical and Applied Genetics Aims and scope Submit manuscript

Abstract

Two hundred and fifty doubled haploid lines were studied from a cross between two 2-row winter barley varieties. The lines were evaluated for several characters in a field experiment for 3 years on two locations with two replications. From a total of 431 RFLP probes 50 were found to be polymorphic and subsequently used to construct a linkage map. Quantitative trait loci (QTLs) were determined and localized for resistance against Rhynchosporium secalis and Erysiphe graminis, for lodging, stalk breaking and ear breaking tendency, for the physical state before harvest, plant height, heading date, several kernel parameters and kernel yield. The heritability of the traits ranged from 0.56 to 0.89. For each trait except for kernel thickness, QTLs have been localized that explain 5–52% of the genetic variance. Transgressive segregation occurred for all of the traits studied.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Abbott DC, Burdon JJ, Jarosz AM, Brown AHD, Müller WJ, Read BJ (1991) The relationship between seedling infection types and field reactions to leaf scald in Clipper barley backcross lines. Austr J Agric Res 42:801–809

    Google Scholar 

  • Ahn SN, Bollich CN, McClung AM, Tanksley SD (1993) RFLP analysis of genomic regions associated with cooked-kernel elongation in rice. Theor Appl Genet 87:27–32

    Google Scholar 

  • Barua UM, Chalmers KJ, Thomas WTB, Hackett CA (1993) Molecular mapping of genes determining height, time to heading and groth habit in barley (Hordeum vulgare). Genome 36:1080–1087

    Google Scholar 

  • Boppenmaier J, Melchinger AE, Brunklaus-Jung, E, Geiger, H, Herrmann RG (1992) Genetic diversity for RFLPs in European maize inbreds: I. relation to performance of flint x dent crosses for forage traits. Crop Sci 32:895–902

    Google Scholar 

  • Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314–331

    CAS  PubMed  Google Scholar 

  • Edwards MD, Helentjaris T, Wright S, Stuber CW (1992) Molecular-marker-facilitated investigations of quantitative trait loci in maize. 4. Analysis based on genome saturation with isozyme and restriction fragment length polymorphism markers. Theor Appl Genet 83:765–774

    Google Scholar 

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13

    CAS  PubMed  Google Scholar 

  • Foroughi-Wehr B, Wenzel G (1990) Recurrent selection alternating with haploid steps a rapid breeding procedure for combining agronomic traits in inbreeders. Theor Appl Genet 80:564–568

    Google Scholar 

  • Fujita M, Kawada N, Tahier M (1992) Relationship between cold resistance, heading traits and ear primordia development of wheat cultivars. Euphytica 64:123–130

    Google Scholar 

  • Gebhardt C, Ritter E, Barone A, Debener T, Walkemeier B, Schachtschabel U, Kaufmann H, Thompson RD, Bonierbale MW, Ganal MW, Tanksley SD, Salamini F (1991) RFLP maps of potato and their alignment with the homoeologous tomato genome. Theor Appl Genet 83:49–57

    Google Scholar 

  • Geldermann H (1975) Investigations on inheritance of quantitative characters in animals by gene markers. I. Methods. Theor Appl Genet 46:319–330

    Google Scholar 

  • Graner A, Jahoor A, Schondelmaier J, Siedler H, Pillen K, Fischbeck G, Wenzel G, Herrmann RG (1991) Construction of an RFLP map of barley. Theor Appl Genet 83:250–256

    Google Scholar 

  • Graner A, Siedler H, Jahoor A, Herrmann RG, Wenzel G (1990) Assessment of the degree and the type of restriction fragment length polymorphism in barley (Hordeum vulgare). Theor Appl Genet 80:826–832

    Google Scholar 

  • Haley CS, Knott SA (1992) A simple regression method for mapping quantitative trait loci in line crosses using flanking markers. Heredity 69:314–324

    Google Scholar 

  • Hayes PM, Liu BH, Knapp SJ, Chen F, Jones B, Blake T, Franckowiak J, Rasmusson D, Sorells M, Ullrich SE, Wesenberg D, Kleinhofs A (1993) Quantitative trait locus effects and environmental interaction in a sample of North American barley germ plasm. Theor Appl Genet 87:392–401

    Google Scholar 

  • Helentjaris T (1987) A genetic linkage map for maize based on RFLPs. Trends Genet 3:217–221

    Google Scholar 

  • Heun M (1992) Mapping quantitative powdery mildew resistance of barley using a restriction fragment polymorphism map. Genome 35:1019–1025

    Google Scholar 

  • Jahoor A, Backes G, Graner A, Herrmann RG, Fischbeck G (1991) Development of RFLP markers for barley. Plant Breeding 107: 73–76

    Google Scholar 

  • Kinzer SM., Schwager SJ, Mutschler MA (1990) Mapping of ripening-related or -specific cDNA clones of tomato (Lycopersicon esculentum). Theor Appl Genet 79:489–496

    Google Scholar 

  • Kleinhofs A, Kilian A, Saghai Maroof MA, Biyashev RM, Hayes P, Chen FQ, Lapitan N, Fenwick A, Blake TK, Kanazin V, Ananiev E, Dahleen, Kudrna D, Bollinger J, Knapp SJ, Liu B, Sorells M, Heun M, Franckowiak JD, Hoffman D, Skadsen R, Steffenson BJ (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome. Theor Appl Genet 86:705–712

    CAS  Google Scholar 

  • Knapp SJ, Bridges WC Jr, Birkes D (1990) Mapping quantitative trait loci using molecular marker linkage maps. Theor Appl Genet 79:583–592

    Google Scholar 

  • Lander ES, Botstein D (1989) Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121:185–199

    CAS  PubMed  Google Scholar 

  • Lander E, Green P, Abrahamson J, Barlow A, Daley M, Lincoln S, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174–181

    CAS  PubMed  Google Scholar 

  • Liu YG (1991) Restriction fragment length polymorphism (RFLP) analysis in wheat. II. Linkage maps of the RFLP sites in common wheat. Jpn J Genet 66:617–633

    Google Scholar 

  • Melchinger AE, Bopppenmaier J, Dhillon BS, Pollmer WG, Herrmann RG (1992) Genetic diversity for RFLPs in European maize inbreds: II. Relationships to performance of hybrids within versus between heterotic groups for forage traits. Theor Appl Genet 84:672–681

    Google Scholar 

  • Paterson SH, Lander ES, Hewitt JD, Peterson S, Lincoln SE, Tanksley SD (1988) Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment polymorphism. Nature 225:721–726

    Google Scholar 

  • Pillen K, Steinrücken G, Wricke G, Herrmann RG, Jung C (1992) A linkage map of sugar beet. Theor Appl Genet 84:129–135

    Google Scholar 

  • Reed KC, Mann DA (1985) Rapid transfer of DNA from agarose gels to nylon membranes. Nucl Acids Res 20:7207–7221

    Google Scholar 

  • Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal spacerlength polymorphisms in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc Natl Acad Sci USA 81:8041–8108

    Google Scholar 

  • Schön CS, Lee M, Melchinger AE, Guthrie WD, Woodman WL (1993) Mapping and characterization of quantitative trait loci affecting resistance against second-generation European corn borer in maize with the aid of RFLPs. Heridity 70:648–659

    Google Scholar 

  • SPSS Corp. (1993) SPSS® for Windows: Advanced StatisticsTM, Release 6.0. SPSS Corp., Chikago

    Google Scholar 

  • Tanksley SD, Medina-Filho H, Rick CM (1982) Use of naturally-occuring enzyme variation to detect map gene controlling quantitative traits in an interspecific backcross of the tomato and potato genomes. Heredity 49:11–25

    Google Scholar 

  • Tanksley SD, Rick CM (1980) Isozymic Gene Linkage Map of Tomato. Applications in Genetics and Breeding. Theor Appl Genet 57:161–170

    Google Scholar 

  • Thomas WTB, Powell W, Swanston JS (1991) The effects of major genes on quantitatively variing characters in barley. 4. The GPert and denso loci and quality characters. Heredity 66:381–389

    Google Scholar 

  • Vallejos CE, Tanksley SD (1983) Segregation of isozyme markers and cold tolerance in an interspecific backcross of tomato. Theor Appl Genet 66:241–247

    Google Scholar 

  • Weber JL, May PE (1989) Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet 44:388–396

    CAS  PubMed  Google Scholar 

  • Weller JI, Soller M, Brody T (1988) Linkage analysis of quantitative traits in an interspecific cross of tomato (Lycopersicon esculentum x Lycopersicon pimpinellifolium) by means of genetic markers. Nucleic Acids Res 18:6531–6535

    Google Scholar 

  • Wright S (1968) Evolution and the genetics of populations. Vol. 1. Genetics and biometrical foundations. University of Chicago Press, Chicago

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by F. Salamini

Rights and permissions

Reprints and permissions

About this article

Cite this article

Backes, G., Graner, A., Foroughi-Wehr, B. et al. Localization of quantitative trait loci (QTL) for agronomic important characters by the use of a RFLP map in barley (Hordeum vulgare L.). Theoret. Appl. Genetics 90, 294–302 (1995). https://doi.org/10.1007/BF00222217

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00222217

Key words

Navigation