Skip to main content
Log in

Isolation and characterisation of cDNA clones representing the genes encoding the major tuber storage protein (dioscorin) of yam (Dioscorea cayenensis Lam.)

  • Research Article
  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

cDNA clones encoding dioscorins, the major tuber storage proteins (M r 32000) of yam (Dioscorea cayenensis) have been isolated. Two classes of clone (A and B, based on hybrid release translation product sizes and nucleotide sequence differences) which are 84.1% similar in their protein coding regions, were identified. The protein encoded by the open reading frame of the class A cDNA insert is of M r 30015. The difference in observed and calculated molecular mass might be attributed to glycosylation. Nucleotide sequencing and in vitro transcription/translation suggest that the class A dioscorin proteins are synthesised with signal peptides of 18 amino acid residues which are cleaved from the mature peptide. The class A and class B proteins are 69.6% similar with respect to each other, but show no sequence identity with other plant proteins or with the major tuber storage proteins of potato (patatin) or sweet potato (sporamin). Storage protein gene expression was restricted to developing tubers and was not induced by growth conditions known to induce expression of tuber storage protein genes in other plant species. The codon usage of the dioscorin genes suggests that the Dioscoreaceae are more closely related to dicotyledonous than to monocotyledonous plants.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Ainsworth CC, Clark J, Balsdon J: Expression, organisation and structure of the genes encoding the waxy protein (granule bound starch synthase) in wheat. Plant Mol Biol 22: 67–82 (1993).

    Google Scholar 

  2. Akoruda MO: Genetic improvement of vegetable crops: yam (Dioscorea spp.) In: Kasloo et al. (ed), Genetic Improvement of Vegetable Crops, pp. 717–733. Pergamon Press (1984).

  3. Andrews DL, Beames B, Summers MD, Park WD: Characterization of the lipid acyl hydrolase activity of the major potato (Solanum tuberosum) tuber protein, patatin, by cloning and abundant expression in a baculovirus vector. Biochem J 252: 199–206 (1988).

    Google Scholar 

  4. Baguar SR, Oke OL: Protein in Nigerian yams (Dioscorea sp.). Nutr Rep Int 14: 237–248 (1976).

    Google Scholar 

  5. Beccari O: Nota sull' embrione delle Dioscoreaceae. Nuovo G Bot Ital 2: 150 (1870).

    Google Scholar 

  6. Conlan RS, Griffiths L-A, Shewry PR, Ainsworth CC, Tatham AS: Isolation and characterisation of the major soluble tuber protein dioscorin from Dioscorea alata L. and Dioscorea cayenensis (in preparation).

  7. Coursey DG: Yams. In Simmonds NW (ed) Evolution of Crop Plants, pp. 70–74. Longman, London (1976).

    Google Scholar 

  8. Griffiths LA: Characterisation of yam (Dioscorea) tuber storage proteins and cDNA clones. Ph.D. thesis, University of London (1991).

  9. Gurr SJ, McPherson MJ: PCR-directed cDNA libraries. In: McPherson MJ, Quirke P, Taylor GR (eds) PCR: Practical Approach, pp. 147–170. IRL Press (1991).

  10. Harvey PJ, Boulter D: Isolation and characterisation of the storage protein of yam tubers. Phytochemistry 22: 1687–1693 (1983).

    Google Scholar 

  11. Hattori T, Matsuoka K, Nakamura K: Subcellular localisation of the sweet potato tuberous root storage protein. Agric Biol Chem 52: 1057–1059 (1988).

    Google Scholar 

  12. Hattori T, Nakagawa S, Nakamura K: High-level expression of tuberous root storage genes of sweet potato in stems of plantlets grown in vitro on sucrose medium. Plant Mol Biol 14: 595–604 (1990).

    Google Scholar 

  13. Hattori T, Fukumoto H, Nakagawa S, Nakamura K: Sucrose-induced expression of genes coding for the tuberous root storage protein, sporamin of sweet potato in leaves and petioles. Plant Cell Physiol 32: 76–86 (1991).

    Google Scholar 

  14. Hattori T, Yoshida N, Nakamura K: Structural relationship among the members of a multigene family coding for the sweet potato tuberous root storage protein. Plant Mol Biol 13: 563–572 (1989).

    Google Scholar 

  15. Koda Y, Kikuta Y: Possible involvement of jasmonic acid in tuberisation of yam plants. Plant Cell Physiol 32: 629–633 (1993).

    Google Scholar 

  16. Laemmli UK: Cleavage of structural proteins during the assembly of the head of the bacteriophage T4. Nature 227: 680–685 (1976).

    Google Scholar 

  17. Lawton JR, Lawton JRS: The morphology of the dormant embryo and young seedling of five species of Dioscorea from Nigeria. Proc Linn Soc Lond 178: 153–159 (1967).

    Google Scholar 

  18. Lawton JR, Lawton JRS: The development of the tuber in seedlings of five species of Dioscorea from Nigeria. Bot J Linn Soc 62: 223–232 (1969).

    Google Scholar 

  19. Mantell SH, Hague SQ, Whitehall AP: Clonal multiplication of Dioscorea alata and D. rotundata Poir Yams by tissue culture. J Hort Sci 53: 95–98 (1978).

    Google Scholar 

  20. Mantell SH, Hugo SA: Effects of photoperiod, mineral medium strength, inorganic ammonium and cytokinin on root, shoot and microtuber development in shoot cultures of Dioscorea alata L. and D. bulbifera L. yams. Plant Cell Tissue Organ Culture 16: 23–37 (1989).

    Google Scholar 

  21. Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1982).

    Google Scholar 

  22. Murray EE, Lotzer J, Eberle M: Codon usage in plant genes. Nucl Acids Res 17: 477–498 (1989).

    Google Scholar 

  23. Nakamura K, Matsuoka K: Protein targeting in the vacuole in plant cells. Plant Physiol 101: 1–5 (1993).

    Google Scholar 

  24. Pickard CS, Mignery GA, Ma DP, Stark YJ, Park WD: Sequence of two apparent pseudogenes of the major potato protein, patatin. Nucl Acids Res 14: 5564–66 (1986).

    Google Scholar 

  25. Rapoport TA: Transport of proteins across the endoplasmic reticulum membrane. Science 258: 931–936 (1992).

    Google Scholar 

  26. Roche-Sosa M, Sonnewald U, Frommer W, Stratmann M, Schell J, Willmitzer L: Both developmental and metabolic signals activate the promoter of a class I patatin gene. EMBO J 8: 23–29 (1989).

    Google Scholar 

  27. Sanger F, Niklen S, Coulson AR: DNA sequencing with chain termination inhibitors. Proc Natl Acad Sci USA 74: 5463–5467 (1977).

    Google Scholar 

  28. Shewry PR: Biological and evolutionary aspects of cereal seed storage proteins. In: Shewry PR, Stobart AK (eds) Seed Storage Compounds: Biosynthesis, Interactions and Manipulation, pp. 53–78. Oxford University Press, Oxford (1993).

    Google Scholar 

  29. Shewry PR: Plant storage proteins. Biol Rev (in press).

  30. Sonnewald UE, Strum A, Chrispeels M, Willmitzer L: Targeting and glycosylation of patatin, the major potato tuber protein in the leaves of transgenic tobacco. Planta 179: 171–180 (1989).

    Google Scholar 

  31. Staswick P: Novel regulation of vegetative seed storage proteins. Plant Cell 2: 1–6 (1990).

    Google Scholar 

  32. Wenzler HC, Mignery GA, Fisher LM, Park WD: Analysis of a chimeric Class I patatin-GUS gene in transgenic potato plants: High level expression in tubers and sucrose-inducible expression in cultured leaf and stem explants. Plant Mol Biol 12: 41–50 (1989).

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Conlan, R.S., Griffiths, LA., Napier, J.A. et al. Isolation and characterisation of cDNA clones representing the genes encoding the major tuber storage protein (dioscorin) of yam (Dioscorea cayenensis Lam.). Plant Mol Biol 28, 369–380 (1995). https://doi.org/10.1007/BF00020387

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00020387

Key words

Navigation