Skip to main content

Advertisement

Log in

Molecular cloning, characterization and expression of PmRsr1, a Ras-related gene from yeast form of Penicillium marneffei

  • Published:
Molecular Biology Reports Aims and scope Submit manuscript

Abstract

GTP-binding proteins such as Ras act as molecular switches in a large number of signal pathways. In this report, we isolated and characterized a novel Ras small monomeric GTPase Rsr1 gene, designated PmRsr1, from yeast-form Penicillium marneffei. The full-length PmRsr1 cDNA sequence is 1,866 bp in size, and contains an open reading frame of 642 bp encoding 213 amino acids. The predicted molecular mass of PmRsr1 is 24.41 kDa with an estimated theoretical isoelectric point of 9.21. The deduced amino acid sequence of PmRsr1 shows 87% identity with that of Aspergillus fumigatus and A. clavatus. Eight exons and seven introns are identified within the 2,102 bp PmRsr1 genomic DNA sequence of P. marneffei. The open reading frame was subcloned into the pcDNA6-myc-His B expression vector, and the recombinant plasmid was transfected into Vero cell line. The expressed fusion protein was analyzed by SDS-PAGE and western blotting. Differential expression of the PmRsr1 was demonstrated by real-time RT-PCR. The expression of PmRsr1 was the highest in the yeast phase comparing with that in the mycelia and conidia phases.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

Abbreviations

SDS:

Sodium dodecyl sulfate

PAGE:

Polyacrylamide gel electrophoresis

RT:

Reverse transcriptase

PCR:

Polymerase chain reaction

RACE:

Rapid amplification of cDNA ends

MMLV:

Moloney murine leukaemia virus

HRP:

Horseradish peroxidase

References

  1. Supparatpinyo K, Khamwan C, Baosoung V, Nelson KE, Sirisanthana T (1994) Disseminated Penicillium marneffei infection in southeast Asia. Lancet 344:110–113

    Article  CAS  PubMed  Google Scholar 

  2. Andrianopoulos A (2002) Control of morphogenesis in the human fungal pathogen Penicillium marneffei. Int J Med Microbiol 292:331–347

    Article  PubMed  Google Scholar 

  3. Liyan X, Changming L, Xianyi Z, Luxia W, Suisheng X (2004) Fifteen cases of penicilliosis in Guangdong, China. Mycopathologia 158:151–155

    Article  PubMed  Google Scholar 

  4. Chan YF, Chow TC (1990) Ultrastructural observations on Penicillium marneffei in natural human infection. Ultrastruct Pathol 14:439–452

    Article  CAS  PubMed  Google Scholar 

  5. Boyce KJ, Hynes MJ, Andrianopoulos A (2005) The Ras and Rho GTPases genetically interact to co-ordinately regulate cell polarity during development in Penicillium marneffei. Mol Microbiol 55:1487–1501

    Article  CAS  PubMed  Google Scholar 

  6. Park HO, Bi E (2007) Central roles of small GTPases in the development of cell polarity in yeast and beyond. Microbiol Mol Biol Rev 71:48–96

    Article  CAS  PubMed  Google Scholar 

  7. Lengeler KB, Davidson RC, D’souza C, Harashima T, Shen WC, Wang P, Pan X, Waugh M, Heitman J (2000) Signal transduction cascades regulating fungal development and virulence. Microbiol Mol Biol Rev 64:746–785

    Article  CAS  PubMed  Google Scholar 

  8. Bender A, Pringle JR (1989) Multicopy suppression of the cdc24 budding defect in yeast by CDC42 and three newly identified genes including the ras-related gene RSR1. Proc Natl Acad Sci USA 86:9976–9980

    Article  CAS  PubMed  Google Scholar 

  9. Kozminski KG, Beven L, Angerman E, Tong AH, Boone C, Park HO (2003) Interaction between a Ras and a Rho GTPase couple’s selection of a growth site to the development of cell polarity in yeast. Mol Biol Cell 14:4958–4970

    Article  CAS  PubMed  Google Scholar 

  10. Bauer Y, Knechtle P, Wendland J, Helfer H, Philippsen P (2004) A Ras-like GTPase is involved in hyphal growth guidance in the filamentous fungus Ashbya gossypii. Mol Biol Cell 15:4622–4632

    Article  CAS  PubMed  Google Scholar 

  11. Yaar L, Mevarech M, Koltin Y (1997) A Candida albicans RAS-related gene (CaRSR1) is involved in budding, cell morphogenesis and hypha development. Microbiology 143:3033–3044

    Article  CAS  PubMed  Google Scholar 

  12. Hausauer DL, Gerami-Nejad M, Kistler-Anderson C, Gale CA (2005) Hyphal guidance and invasive growth in Candida albicans require the Ras-like GTPase Rsr1p and its GTPase-activating protein Bud2p. Eukaryot Cell 4:1273–1286

    Article  CAS  PubMed  Google Scholar 

  13. Brand A, Vacharaksa A, Bendel C, Norton J, Haynes P, Henry-Stanley M, Wells C, Ross K, Gow NA, Gale CA (2008) An internal polarity landmark is important for externally induced hyphal behaviors in Candida albicans. Eukaryot Cell 7:712–720

    Article  CAS  PubMed  Google Scholar 

  14. Liu H, Xi L, Zhang J, Li X, Liu X, Lu C, Sun J (2007) Identifying differentially expressed genes in the dimorphic fungus Penicillium marneffei by suppression subtractive hybridization. FEMS Microbiol Lett 270:97–103

    Article  CAS  PubMed  Google Scholar 

  15. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  CAS  PubMed  Google Scholar 

  16. Tirosh I, Berman J, Barkai N (2007) The pattern and evolution of yeast promoter bendability. Trends Genet 23:318–321

    Article  CAS  PubMed  Google Scholar 

  17. Kupfer DM, Drabenstot SD, Buchanan KL, Lai H, Zhu H, Dyer DW, Roe BA, Murphy JW (2004) Introns and splicing elements of five diverse fungi. Eukaryot Cell 3:1088–1100

    Article  PubMed  Google Scholar 

  18. Deutsch M, Long M (1999) Intron-exon structures of eukaryotic model organisms. Nucleic Acids Res 27:3219–3228

    Article  CAS  PubMed  Google Scholar 

  19. Rep M, Duyvesteijn RG, Gale L, Usgaard T, Cornelissen BJ, Ma LJ, Ward TJ (2006) The presence of GC-AG introns in Neurospora crassa and other euascomycetes determined from analyses of complete genomes: implications for automated gene prediction. Genomics 87:338–347

    Article  CAS  PubMed  Google Scholar 

  20. Takai Y, Sasaki T, Matozaki T (2001) Small GTP-binding proteins. Physiol Rev 81:153–208

    CAS  PubMed  Google Scholar 

  21. Paduch M, Jelen F, Otlewski J (2001) Structure of small G proteins and their regulators. Acta Biochim Pol 48:829–850

    CAS  PubMed  Google Scholar 

  22. LoBuglio KF, Taylor JW (1995) Phylogeny and PCR identification of the human pathogenic fungus Penicillium marneffei. J Clin Microbiol 33:85–89

    CAS  PubMed  Google Scholar 

  23. Galagan JE, Calvo SE, Cuomo C et al (2005) Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438:1105–1115

    Article  CAS  PubMed  Google Scholar 

  24. Park HO, Kang PJ, Rachfal AW (2002) Localization of the Rsr1/Bud1 GTPase involved in selection of a proper growth site in yeast. J Biol Chem 277:26721–26724

    Article  CAS  PubMed  Google Scholar 

  25. Kawasaki R, Fujimura-Kamada K, Toi H, Kato H, Tanaka K (2003) The upstream regulator, Rsr1p, and downstream effectors, Gic1p and Gic2p, of the Cdc42p small GTPase coordinately regulate initiation of budding in Saccharomyces cerevisiae. Genes Cells 8:235–250

    Article  CAS  PubMed  Google Scholar 

  26. Fortwendel JR, Zhao W, Bhabhra R, Park S, Perlin DS, Askew DS, Rhodes JC (2005) A fungus-specific ras homolog contributes to the hyphal growth and virulence of Aspergillus fumigatus. Eukaryot Cell 4:1982–1989

    Article  CAS  PubMed  Google Scholar 

  27. Onken B, Wiener H, Philips MR, Chang EC (2006) Compartmentalized signaling of Ras in fission yeast. Proc Natl Acad Sci USA 103:9045–9050

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgement

This work was supported in part by a grant (30770121/2007) from the National Natural Science Foundation of China.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Liyan Xi.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Feng, P., Xie, Z., Sun, J. et al. Molecular cloning, characterization and expression of PmRsr1, a Ras-related gene from yeast form of Penicillium marneffei . Mol Biol Rep 37, 3533–3540 (2010). https://doi.org/10.1007/s11033-009-9947-y

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11033-009-9947-y

Keywords

Navigation