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Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus

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Abstract

We report the complete genome sequences of four neurovirulent isolates of porcine rubulavirus (PorPV) from 2015 and one historical PorPV isolate from 1984 obtained by next-generation sequencing. A phylogenetic tree constructed using the individual sequences of the complete HN genes of the 2015 isolates and other historical sequences deposited in the GenBank database revealed that several recent neurovirulent isolates of PorPV (2008-2015) cluster together in a separate clade. Phylogenetic analysis of the complete genome sequences revealed that the neurovirulent strains of PorPV that circulated in Mexico during 2015 are genetically different from the PorPV strains that circulated during the 1980s.

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Acknowledgements

We kindly thank Dr. Alfonso Méndez Tenorio for his help in the construction of the phylogenetic trees. The present work was supported by SIP-IPN 20150989 and 20161619.

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Correspondence to Jesus Torres-Flores.

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None of the authors of this paper has a financial or personal relationship with other people or organisations that could inappropriately influence or bias the content of the paper.

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Supplementary material 1 (DOC 44 kb) Appendix A: Supplementary material: Supplementary data associated with this article can be found in the supplementary material file (Garcia-Barrera et al_SupMat.docx)

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Garcia-Barrera, A.A., Del Valle, A., Montaño-Hirose, J.A. et al. Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus. Arch Virol 162, 1765–1768 (2017). https://doi.org/10.1007/s00705-017-3267-7

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  • DOI: https://doi.org/10.1007/s00705-017-3267-7

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