Abstract
Autophagy protects colorectal cancer cells against therapeutic intervention. Autophagy is a continuous process, and autophagic flux requires both autophagosome synthesis and their subsequent degradation at lysosomes. Hence, cells with elevated autophagic flux display both rapid autophagosome generation and degradation. Here, we describe an immunoblot protocol coupled to pharmaceutical inhibition of autophagosome clearance to monitor autophagic flux levels between colorectal cancer cell lines.
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References
Mizushima N, Komatsu M (2011) Autophagy: renovation of cells and tissues. Cell 147(4):728–741. https://doi.org/10.1016/j.cell.2011.10.026
Levine B, Kroemer G (2008) Autophagy in the pathogenesis of disease. Cell 132(1):27–42. https://doi.org/10.1016/j.cell.2007.12.018
Galluzzi L, Pietrocola F, Bravo-San Pedro JM, Amaravadi RK, Baehrecke EH, Cecconi F, Codogno P, Debnath J, Gewirtz DA, Karantza V, Kimmelman A, Kumar S, Levine B, Maiuri MC, Martin SJ, Penninger J, Piacentini M, Rubinsztein DC, Simon HU, Simonsen A, Thorburn AM, Velasco G, Ryan KM, Kroemer G (2015) Autophagy in malignant transformation and cancer progression. EMBO J 34(7):856–880. https://doi.org/10.15252/embj.201490784
Kimmelman AC (2011) The dynamic nature of autophagy in cancer. Genes Dev 25(19):1999–2010. https://doi.org/10.1101/gad.17558811
Burada F, Nicoli ER, Ciurea ME, Uscatu DC, Ioana M, Gheonea DI (2015) Autophagy in colorectal cancer: an important switch from physiology to pathology. World J Gastrointest Oncol 7(11):271–284. https://doi.org/10.4251/wjgo.v7.i11.271
Groulx JF, Khalfaoui T, Benoit YD, Bernatchez G, Carrier JC, Basora N, Beaulieu JF (2012) Autophagy is active in normal colon mucosa. Autophagy 8(6):893–902. https://doi.org/10.4161/auto.19738
Sato K, Tsuchihara K, Fujii S, Sugiyama M, Goya T, Atomi Y, Ueno T, Ochiai A, Esumi H (2007) Autophagy is activated in colorectal cancer cells and contributes to the tolerance to nutrient deprivation. Cancer Res 67(20):9677–9684. https://doi.org/10.1158/0008-5472.CAN-07-1462
Zheng HY, Zhang XY, Wang XF, Sun BC (2012) Autophagy enhances the aggressiveness of human colorectal cancer cells and their ability to adapt to apoptotic stimulus. Cancer Biol Med 9(2):105–110. https://doi.org/10.3969/j.issn.2095-3941.2012.02.004
Klionsky DJ et al (2016) Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). Autophagy 12(1):1–222. https://doi.org/10.1080/15548627.2015.1100356
Mizushima N, Yoshimori T (2007) How to interpret LC3 immunoblotting. Autophagy 3(6):542–545
Nakatogawa H, Ichimura Y, Ohsumi Y (2007) Atg8, a ubiquitin-like protein required for autophagosome formation, mediates membrane tethering and hemifusion. Cell 130(1):165–178. https://doi.org/10.1016/j.cell.2007.05.021
Watanabe Y, Tanaka M (2011) p62/SQSTM1 in autophagic clearance of a non-ubiquitylated substrate. J Cell Sci 124(Pt 16):2692–2701. https://doi.org/10.1242/jcs.081232
Fujita N, Hayashi-Nishino M, Fukumoto H, Omori H, Yamamoto A, Noda T, Yoshimori T (2008) An Atg4B mutant hampers the lipidation of LC3 paralogues and causes defects in autophagosome closure. Mol Biol Cell 19(11):4651–4659. https://doi.org/10.1091/mbc.E08-03-0312
Chen Y, Klionsky DJ (2011) The regulation of autophagy—unanswered questions. J Cell Sci 124(Pt 2):161–170. https://doi.org/10.1242/jcs.064576
Kimura S, Fujita N, Noda T, Yoshimori T (2009) Monitoring autophagy in mammalian cultured cells through the dynamics of LC3. Methods Enzymol 452:1–12. https://doi.org/10.1016/S0076-6879(08)03601-X
Mauvezin C, Nagy P, Juhasz G, Neufeld TP (2015) Autophagosome-lysosome fusion is independent of V-ATPase-mediated acidification. Nat Commun 6:7007. https://doi.org/10.1038/ncomms8007
Acknowledgments
This work was supported by grants from the Canadian Institutes of Health Research (CIHR) and the Cancer Research Society (CRS) to S.J. and by junior faculty salary awards from the CIHR and Fond de Recherche du Québec—Santé (FRQS) to S.J.. Steve Jean is a member of the FRSQ-Funded Centre de Recherche du CHUS.
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Lauzier, A., Jean, S. (2018). Autophagic Flux Assessment in Colorectal Cancer Cells. In: Beaulieu, JF. (eds) Colorectal Cancer. Methods in Molecular Biology, vol 1765. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7765-9_10
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DOI: https://doi.org/10.1007/978-1-4939-7765-9_10
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