Abstract
WRKY proteins constitute a large family of plant specific transcription factors implicated in many different processes. Here we describe Hv-WRKY38,a barley gene coding for a WRKY protein, whose expression is involved in cold and drought stress response. Hv-WRKY38 was early and transiently expressed during exposure to low non-freezing temperature, in ABA-independent manner. Furthermore, it showed a continuous induction during dehydration and freezing treatments. A WRKY38:YFP fusion protein was found to localise into the nucleus upon introduction into epidermal onion cells. Bacterially expressed Hv-WRKY38 was able to bind in vitro to the W-box element (T)TGAC(C/T) also recognisable by other WRKY proteins. Hv-WRKY38genomic DNA was sequenced and mapped onto the centromeric region of the barley chromosome 6H. Arabidopsis and rice sequences homologous to Hv-WRKY38 were also identified. Our results indicate that Hv-WRKY38 transcription factor may play a regulatory role in abiotic stress response.
Similar content being viewed by others
References
Baldi, P., Grossi, M., Pecchioni, N., Vale`, G. and Cattivelli, L. 1999. High expression level of a gene coding for chloroplastic amino acid selective channel protein is correlated to cold acclimation in cereals. Plant Mol.Biol. 41: 233–243.
Baldi, P., Vale`, G., Mazzucotelli, E., Govoni, C., Faccioli, P., Stanca, A. M. and Cattivelli, L. 2001. The transcripts of several components of the protein synthesis machinery are cold regulated in a chloroplast-dependent manner in barley and wheat. J. Plant Physiol. 158: 1541–1546.
Bonetta, D. and McCourt, P. 1998. Genetic analysis of ABA signal transduction pathways. Trends Plant Sci. 6: 231–235.
Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of proteins utilizing the principles of protein dye binding. Anal. Biochem. 72: 248–254.
Burnham, C. R., Eslick, R. F., Haus, T. E., Hockett, E. A., Jarvi, A. J., McProud, W. L. and Tsushiya, T. 1971. Description of genetic stocks in the barley genetic stock center at Fort Collins, Colorado. Barley Genet. News 1: 103–193.
Chen, C. and Chen, Z. 2000. Isolation and characterization of two pathogen-and salicylic acid-induced genes encoding WRKY DNA-binding proteins from tobacco. Plant Mol. Biol. 42: 387–396.
Chinnusamy, V., Ohta, M., Kanrar, S., Lee, B. H., Hong, X., Agarwal, M. and Zhu, J. K. 2003. ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Genes Dev. 17(8): 1043–1054.
Choi, D. W., Koag, M. C. and Close, T. J. 1999. The barley (Hordeum vulgare L. ) dehydrin multigene family: sequences, allele types, chromosome assignments and expression characteristic of 11 Dhn genes of cv. Dictoo. Theor. Appl. Genet. 98: 1234–1247.
Choi, D.-W., Rodriguez, E. M. and Close, T. J. 2002. Barley Cbf3 gene identification, expression pattern and map location. Plant Physiol. 129: 1781–1787.
Crosatti, C., Polverino de Laureto, P., Bassi, R. and Cattivelli, L. 1999. The interaction between cold and light controls the expression of the cold-regulated barley gene cor14b and the accumulation of the corresponding protein. Plant Physiol. 119(2): 671–680.
Dal Bosco, C., Busconi, M., Govoni, C., Baldi, P., Stanca, A. M., Crosatti, C., Bassi, R. and Cattivelli, L. 2003. Cor gene expression in barley mutants affected in chloroplast development and photosynthetic electron transport. Plant Physiol. 131: 793–802.
de Pater, S., Greco, V., Pham, K., Memelink, %J. and Kijne, %J. 1996. Characterization of a zinc-dependent transcriptional activator from Arabidopsis. Nucleic. Acids Res. 24: 4624–4631.
Desprè s, C., Subramaniam, R., Matton, D. P. and Brisson, N. 1995. The activation of the Potato PR-10a gene requires the phosphorylation of the nuclear factor PBF-1. Plant Cell 7: 589–598.
Devos, K. M. and Gale, M. D. 1997. Comparative genetics in the grasses. Plant Mol. Biol. 35: 3–15.
Dong, J., Chen, C. and Che, Z. 2003. Expression profile of the Arabidopsis WRKY gene superfamily during plant defense response. Plant Mol. Biol. 51: 21–37.
Du, L. and Chen, Z. 2000. Identification of genes encoding receptor-like protein kinases as possible targets of pathogenand salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis. Plant J. 24(6): 837–847.
Eulgem, T., Rushton, P. J., Schmelzer, E., Hahlbrock, K. and Somssich, I. E. 1999. Early nuclear events in plant defense signaling: rapid gene activation by WRKY transcription factors. EMBO J. 18: 4689–4699.
Eulgem, T., Rushton, P. J., Robatzek, S. and Somssich, I. E. 2000. The WRKY superfamily of plant transcription factors. Trends Plant Sci. 5: 199–206.
Fowler, S. and Thomashow, F. 2002. Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway. Plant Cell 14: 1675–1690.
Francia, E., Rizza, F., Cattivelli, L., Stanca, A. M., Galiba, G., Tóth, B., Hayes, P. M., Skinner J. S. and Pecchioni, N. 2004.Two loci on chromosome 5H determine low-temperature tolerance in a Nure (winter) × Tremois (spring) barley map. Theor. Appl. Genet. 108: 670–680.
Hara, K., Yagi, M., Kusano T. and Sano, H. 2000. Rapid systemic accumulation of transcripts encoding a tobacco WRKY transcription factor upon wounding. Mol. Gen. Genet. 263: 30–37.
Huang, T. and Duman, J. G. 2002. Cloning and characterization of a thermal hysteresis (antifreeze) protein with DNA-binding activity from winter bittersweet nightshade, Solanum dulcamara. Plant Mol. Biol. 48: 339–350.
Johnson, C. S., Kolevski, B. and Smyth, D. R. 2002. TRANSPARENT TESTA GLABRA2, atrichome and seed coat development gene of Arabidopsis, encode a WRKY transcription factor. Plant Cell 14: 1359–1375.
Lander, E. S., Green, P., Abrahamson, J., Barlow, A., Daly, M. J., Lincoln, S. E. and Newburg, L. 1987. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1(2): 174–181.
Lemaux, P. G., Cho, M. J., Louwerse, J. D., Williams, R. and Wan, Y. 1996. Bombardment mediated transformation methods for barley. BioRad US/EG Bull. 2007: 1–6.
Liang, P. and Pardee, A. B. 1992. Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 257: 967–971.
Maleck, K., Levine, A., Eulgem, T., Morgan, A., Schmidl, J., Lawton, K. A., Dangl, J. L. and Dietrich, R. A. 2000. An Arabidopsis promoter element shared among genes co-regulated during systemic acquired disease resistance. Nat. Genet. 26: 403–410.
Mano, Y. and Takeda, K. 1997. Mapping quantitative trait loci for salt tolerance at germination and the seedling stage in barley (Hordeum vulgare L. ). Euphytica 94: 263–272.
Merkle, T. 2001. Nuclear import and export of proteins in plants: a tool for the regulation of signaling.Planta 213: 499–517.
Pnueli, L., Hallak-Herr, E., Rozenberg, M., Cohen, M., Goloubinoff, P., Kaplan, A. and Mittler, R., 2002. Molecular and biochemical mechanisms associated with dormancy and drought tolerance in the desert legume Retama raetam. Plant J. 31: 319–330.
Rizhsky, L., Liang, H. and Mittler, R. 2002. The combined effect of drought stress and heat shock on gene expression in tobacco. Plant Physiol. 130: 1143–1151.
Robatzek, S. and Somssich, I. 2001. A new member of the Arabidopsis WRKY transcription factor family, AtWRKY6, is associated with both senescence and defence-related processes. Plant J. 28: 123–133.
Robatzek, S. and Somssich, I. 2002. Targets of AtWRKY6 regulation during plant senescence and pathogen defense. Genes Dev. 16: 1139–1149.
Rogers, J. C. and Rogers, S. W. 1992. Definition and functional implications of gibberellin and abscissic acid cis-acting hormone response complexes. Plant Cell 4: 1443–1451.
Rowland, O. and Jones, J. D. G. 2001. Unraveling regulatory networks in plant defense using microarrays. Genome Biol. 2(1):reviews 1001. 1–1001.
Rushton, P. J., Macdonald, H., Huttly, A. K., Lazarus, C. M. and Hooley, R. 1995. Members of a new family of DNA-binding proteins bind to a conserved cis-element in the promoters of alpha-Amy2 genes. Plant Mol. Biol. 29: 691–702.
Rushton, P. J., Torres, J. T., Parniske, M., Wernert, P., Hahlbrock, K. and Somssich, I. E. 1996. Interaction of elicitor-induced DNA-binding proteins with elicitor response elements in the promoters of parsley PR1 genes. EMBO J. 15: 5690–5700.
Sambrook, J., Fritsch, E. F. and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
See, D., Kanazin, V., Kephart, K. and Blake, T. 2002. Mapping genes controlling variation in barley grain protein concentration. Crop. Sci. 42: 680–685.
Seki, M., Narusaka, M., Ishida, J., Nanjo, T., Fujita, M., Oono, Y., Kamiya, A., Nakajima, M., Enju, A., Sakurai, T., Satou, M., Akiyama, K., Taji, T., Yamaguchi-Shinozaki, K., Carninci, P., Kawai, J., Hayashizaki, Y. and Shinozaki, K. 2002. Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray. Plant J. 31(3): 279–292.
Shinozaki, K. and Yamaguchi-Shinozaki, K. 2000. Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Curr. Opin. Plant Biol. 3: 217–223.
Shinozaki, K., Yamaguchi-Shinozaki, K. and Seki, M., 2003. Regulatory network of gene expression in the drought and cold stress responses. Curr. Opin. Plant Biol. 5: 410–417.
Sun, C., Palmqvist, S., Olsson, H., Boren, M., Ahlandsberg, S. and Jansson, C. 2003. A novel WRKY transcription factor, SUSIBA2, participates in sugar signaling in barley by binding to the sugar-responsive elements of the iso1 promoter. Plant Cell 15(9): 2076–2092.
Teulat, B., Merah, O., Sirault, X., Borries, C., Waugh, R. and This, D. 2002. QTLs for grain carbon isotope discrimination in field-grown barley. Theor. Appl. Genet 106: 118–126.
Thomashow, M. F. 1999. Plant cold acclimation, freezing tolerance genes and regulatory mechanisms. Annu. Rev. Plant Physiol. Plant Mol. Biol. 50: 571–599.
Thomashow, M. F. 2001. So what's new in the field of plant cold acclimation? Plant Physiol. 125: 89–93.
Tuberosa, R., Galiba, G., Sanguineti, M. C., Noli, E. and Sutka, J. 1997. Identification of QTL influencing freezing tolerance in barley. Acta Agric. Hung. 45: 413–417.
Xue, G. P. 2003. The DNA-binding activity of an AP2 transcriptional activator HvCBF2 involved in regulation of low-temperature responsive genes in barley is modulated by temperature. Plant J. 33: 373–383.
Yamada, T., Kuroda, K., Jitsuyama, Y., Takezawa, D., Arakawa, K. and Fujikawa, S. 2002. Roles of the plasma membrane and the cell wall in the response of plant cell to freezing. Planta 215: 770–778.
Yang, P., Wang, Z., Fan, B., Chen, C. and Chen, Z. 1999. A pathogen-and salicylic acid-induced WRKY DNA-binding activity recognizes the elicitor response element of the tobacco class I chitinase gene promoter. Plant J. 18: 141–149.
Yoda, H., Ogawa, M., Yamaguchi, Y., Koizumi, N., Kusano, T. and Sanop, H. 2002. Identification of early-responsive genes associated with the hypersensitive response to tobacco mosaic virus and characterization of a WRKY-type transcription factor in tobacco plants. Mol. Genet. Genom. 267: 154–161.
Yu, D., Chen, C. and Chen, Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell 13: 1527–1539.
Zhang, Z. L., Xie, Z., Zou, X., Casaretto, J., Ho, T. D. and Shen, Q. 2004. A rice WRKY gene encodes a transcriptional repressor of the gibberellin signalling pathway in aleurone cells. Plant Physiol. 134: 1–14.
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Marè, C., Mazzucotelli, E., Crosatti, C. et al. Hv-WRKY38: a new transcription factor involved in cold- and drought-response in barley. Plant Mol Biol 55, 399–416 (2004). https://doi.org/10.1007/s11103-004-0906-7
Issue Date:
DOI: https://doi.org/10.1007/s11103-004-0906-7