Plant Molecular Biology Reporter
Volume 1 / 1983 - Volume 35 / 2017
within Bioinformatics
Journal
Volume 1 / 1983 - Volume 35 / 2017
Journal
Volume 1 / 1990 - Volume 28 / 2017
Article
The wheat and barley CBF14 genes have been newly defined as key components of the light quality-dependent regulation of the freezing tolerance by the integration of phytochrome-mediated light and temperature sign...
Aliz Novák, Ákos Boldizsár, Krisztián Gierczik… in Plant Molecular Biology Reporter (2017)
Article
Herein we report the observation of atmospheric pressure in-source hydrogen–deuterium exchange (HDX) of thiol group for the first time. The HDX for thiol group was optimized for positive atmospheric pressure p...
Thamina Acter, Donghwi Kim, Arif Ahmed… in Journal of The American Society for Mass S… (2017)
Article
A benchmark comparison between two ion mobility and collision cross-section (CCS) calculators, MOBCAL and IMoS, is presented here as a standard to test the efficiency and performance of both programs. Utilizin...
Vaibhav Shrivastav, Minal Nahin… in Journal of The American Society for Mass S… (2017)
Article
Gaits and gait transitions play a central role in the movement of animals. Symmetry is thought to govern the structure of the nervous system, and constrain the limb motions of quadrupeds. We quantify the symme...
Simon Wilshin, G. Clark Haynes, Jack Porteous, Daniel Koditschek… in Biological Cybernetics (2017)
Article
Here we present a method to manufacture peptide-concentrating MALDI-plates with alkyl ketene dimer (AKD) as a new superhydrophobic coating. The fabrication of the hydrophobic plates included application of AKD...
Joakim Romson, Johan Jacksén, Åsa Emmer in Journal of The American Society for Mass S… (2017)
Article
A miniature ion trap mass spectrometer with capillary direct sampling and vacuum ultraviolet photoionization source was developed to conduct trace analysis of organic compounds in liquids. Self-aspiration samp...
Xinqiong Lu, Quan Yu, Qian Zhang, Kai Ni… in Journal of The American Society for Mass S… (2017)
Article
Paralytic shellfish toxins (PSTs) are neurotoxins produced by dinoflagellates and cyanobacteria that cause paralytic shellfish poisoning in humans. PST quantitation by LC-MS is challenging because of their hig...
Daniel G. Beach in Journal of The American Society for Mass Spectrometry (2017)
Article
Alkylamines are widely used as ion-pairing agents during LC-MS of oligonucleotides. In addition to a better chromatographic separation, they also assist with the desorption of oligonucleotide ions into the gas...
Babak Basiri, Mandi M. Murph… in Journal of The American Society for Mass S… (2017)
Article
We evaluate the impact of carbamylation of the primary amines of the side-chains of Lys and the N-termini on the fragmentation of intact protein ions and the chromatographic properties of a mixture of E. coli rib...
Sylvester M. Greer, Dustin D. Holden… in Journal of The American Society for Mass S… (2017)
Article
MicroRNAs (miRNAs) regulate gene expression at the post-transcriptional level in eukaryotes by directing target mRNAs for degradation or by repressing translation. MicroRNAs are involved in many processes, inc...
Ruicai Long, Mingna Li, Xiao Li, Yanli Gao… in Plant Molecular Biology Reporter (2017)
Article
The differential mobility analyzer (DMA) is a narrow-band linear ion mobility filter operating at atmospheric pressure. It combines in series with a quadrupole mass spectrometer (Q-MS) for mobility/mass analys...
Mario Amo-Gonzalez… in Journal of The American Society for Mass S… (2017)
Article
It is known that many neurons in the brain show spike trains with a coefficient of variation (CV) of the interspike times of approximately 1, thus resembling the properties of Poisson spike trains. Computation...
Johannes Lengler, Angelika Steger in Biological Cybernetics (2017)
Article
An EThcD-based approach for the reliable discrimination of isomeric leucine and isoleucine residues in peptide de novo sequencing procedure has been proposed. A multistage fragmentation of peptide ions was per...
Sergey S. Zhokhov, Sergey V. Kovalyov… in Journal of The American Society for Mass S… (2017)
Article
This paper identifies the potential molecular markers predicting the impact of nTiO2 on plants and explores the new statistical correlations between the biomarkers and growth parameters. The quantitative mRNA exp...
Ranya El-Bakatoushi in Plant Molecular Biology Reporter (2017)
Article
The superbasic proton sponge 1,8-bis(tripyrrolidinylphosphazenyl)naphthalene (TPPN) has been successfully employed for the structural characterization of neutral saccharides, cyclodextrins, and saccharide aldi...
Cosima Damiana Calvano… in Journal of The American Society for Mass S… (2017)
Article
Electrospray ionization (ESI) of LnCl3 (Ln = La-Lu except Pm) and TMGA (tetramethyl glutaramide) mixtures resulted in the formation of gas-phase Ln(TMGA)3 3+ complexes, where tripositive l...
Xiuting Chen, Qingnuan Li, Yu Gong in Journal of The American Society for Mass Spectrometry (2017)
Article
In this paper, we introduce a novel simplification method for dealing with physical systems that can be thought to consist of two subsystems connected in series, such as a neuron and a synapse. The aim of our ...
H. T. van der Scheer, A. Doelman in Biological Cybernetics (2017)
Article
Matrix assisted laser desorption ionization imaging mass spectrometry (MALDI IMS) has proven to be a quick, robust, and label-free tool to produce two-dimensional (2D) ion-density maps representing the distrib...
E. Ellen Jones, Cristine Quiason… in Journal of The American Society for Mass S… (2017)