This is a preview of subscription content, log in via an institution to check access.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Beja O, Suzuki MT, et al. Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage. Environ Microbiol. 2000;2(5):516–29.
DeLong EF, Preston CM, et al. Community genomics among stratified microbial assemblages in the ocean’s interior. Science. 2006;311(5760):496–503.
Feingersch R, Beja O. Bias in assessments of marine SAR11 biodiversity in environmental fosmid and BAC libraries? ISME J. 2009;J3(10):1117–9.
Garcia-Heredia I, Martin-Cuadrado AB, et al. Reconstructing viral genomes from the environment using fosmid clones: the case of haloviruses. PLoS One. 2012;7(3):30.
Ghai R, Martin-Cuadrado A, et al. Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing. ISME J. 2010;9:1154–1166.
Huang Y, Lai X, et al. Characterization of a deep-sea sediment metagenomic clone that produces water-soluble melanin in Escherichia coli. Mar Biotechnol. 2009;11(1):124–31.
Iverson V, Morris RM, et al. Untangling genomes from metagenomes: revealing an uncultured class of marine Euryarchaeota. Science. 2012;335(6068):587–90.
Kim UJ, Shizuya H, et al. Stable propagation of cosmid sized human DNA inserts in an F factor based vector. Nucleic Acids Res. 1992;20(5):1083–5.
Manrao EA, Derrington IM, et al. Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase. Nat Biotechnol. 2012;30(4):349–53.
Martin-Cuadrado AB, Lopez-Garcia P, et al. Metagenomics of the deep Mediterranean, a warm bathypelagic habitat. PLoS One. 2007;2(9):e914.
Martin-Cuadrado AB, Rodriguez-Valera F, et al. Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions. ISME J. 2008;2(8):865–86.
Martin-Cuadrado AB, Ghai R, et al. CO dehydrogenase genes found in metagenomic fosmid clones from the deep Mediterranean sea. Appl Environ Microbiol. 2009;75(23):7436–44.
Munroe DJ, Harris TJ. Third-generation sequencing fireworks at Marco Island. Nat Biotechnol. 2010;28(5):426–8.
Parsley LC, Linneman J, et al. Polyketide synthase pathways identified from a metagenomic library are derived from soil Acidobacteria. FEMS Microbiol Ecol. 2011;78(1):176–87.
Quaiser A, Lopez-Garcia P, et al. Comparative analysis of genome fragments of Acidobacteria from deep Mediterranean plankton. Environ Microbiol. 2008;10(10):2704–17.
Riaz K, Elmerich C, et al. A metagenomic analysis of soil bacteria extends the diversity of quorum-quenching lactonases. Environ Microbiol. 2008;10(3):560–70.
Selvin J, Kennedy J, et al. Isolation identification and biochemical characterization of a novel halo-tolerant lipase from the metagenome of the marine sponge Haliclona simulans. Microb Cell Fact. 2012;11(1):72.
Shizuya H, Birren B, et al. Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector. Proc Natl Acad Sci USA. 1992;89(18):8794–7.
Venter JC, Remington K, et al. Environmental genome shotgun sequencing of the Sargasso Sea. Science. 2004;304(5667):66–74.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer Science+Business Media New York
About this entry
Cite this entry
Rodriguez-Valera, F. (2015). Fosmid System. In: Nelson, K.E. (eds) Encyclopedia of Metagenomics. Springer, Boston, MA. https://doi.org/10.1007/978-1-4899-7478-5_115
Download citation
DOI: https://doi.org/10.1007/978-1-4899-7478-5_115
Published:
Publisher Name: Springer, Boston, MA
Print ISBN: 978-1-4899-7477-8
Online ISBN: 978-1-4899-7478-5
eBook Packages: Biomedical and Life SciencesReference Module Biomedical and Life Sciences