Skip to main content

Comparative and Functional Metagenomics of Akkermansia muciniphila

  • Reference work entry
  • First Online:
  • 196 Accesses

Definition

Akkermansia muciniphila is an important member of the intestinal microbiota that has specialized on colonizing and degrading host-derived mucin.

Introduction

Over the course of evolution, intestines of animals have been colonized with microbes. The symbioses between the host and this microbiota became essential for nutrition and immune development (Dethlefsen et al. 2007; Relman 2012). Within the gastrointestinal tract, the host genome is reinforced with the collective genetic potential (i.e., the metagenome) of the microbiota that adds up to two orders of magnitude of additional genes that comprise a broad range of functions, such as the conversion of complex carbohydrates into short-chain fatty acids (SCFAs), the detoxification of undesired compounds, and the production of various vitamins (Qin et al. 2010).

There are substantial physicochemical, biological, and architectural differences between the major sections of the intestinal tract, including the duodenum, ileum,...

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   499.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD   329.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

References

  • Belzer C, de Vos WM. Microbes inside–from diversity to function: the case of Akkermansia. ISME J. 2012;6(8):1449–58.

    CAS  PubMed Central  PubMed  Google Scholar 

  • Berry D, Schwab C, Milinovich G, et al. Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis. ISME J. 2012;6(11):2091–106.

    CAS  PubMed Central  PubMed  Google Scholar 

  • Derrien M, Vaughan EE, Plugge CM, et al. Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium. Int J Syst Evol Microbiol. 2004;54(Pt 5):1469–76.

    CAS  PubMed  Google Scholar 

  • Derrien M, Van Baarlen P, Hooiveld G, et al. Modulation of mucosal immune response, tolerance, and proliferation in mice colonized by the Mucin-Degrader Akkermansia muciniphila. Front Microbiol. 2011;2:166.

    PubMed Central  PubMed  Google Scholar 

  • Dethlefsen L, McFall-Ngai M, Relman DA. An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature. 2007;449(7164):811–8.

    CAS  PubMed  Google Scholar 

  • Dubourg G, Lagier JC, Armougom F, et al. High-level colonisation of the human gut by Verrucomicrobia following broad-spectrum antibiotic treatment. Int J Antimicrob Agents. 2013;41(2):149–55.

    CAS  PubMed  Google Scholar 

  • Everard A, Lazarevic V, Derrien M, et al. Responses of gut microbiota and glucose and lipid metabolism to prebiotics in genetic obese and diet-induced leptin-resistant mice. Diabetes. 2011;60(11):2775–86.

    CAS  PubMed Central  PubMed  Google Scholar 

  • Everard A, Belzer C, Geurts L, et al. Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity. Proc Natl Acad Sci U S A. 2013;110(22):9066–71.

    CAS  PubMed Central  PubMed  Google Scholar 

  • Hansen CH, Krych L, Nielsen DS, et al. Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse. Diabetologia. 2012;55(8):2285–94.

    CAS  PubMed  Google Scholar 

  • Kamneva OK, Knight SJ, Liberles DA, et al. Analysis of genome content evolution in pvc bacterial super-phylum: assessment of candidate genes associated with cellular organization and lifestyle. Genome Biol Evol. 2012;4(12):1375–90.

    PubMed Central  PubMed  Google Scholar 

  • Koropatkin NM, Cameron EA, Martens EC. How glycan metabolism shapes the human gut microbiota. Nat Rev Microbiol. 2012;10(5):323–35.

    CAS  PubMed Central  PubMed  Google Scholar 

  • Liou AP, Paziuk M, Luevano Jr JM, et al. Conserved shifts in the gut microbiota due to gastric bypass reduce host weight and adiposity. Sci Transl Med. 2013;5(178):178ra141.

    Google Scholar 

  • Png CW, Linden SK, Gilshenan KS, et al. Mucolytic bacteria with increased prevalence in IBD mucosa augment in vitro utilization of mucin by other bacteria. Am J Gastroenterol. 2010;105(11):2420–8.

    CAS  PubMed  Google Scholar 

  • Qin J, Li R, Raes J, et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature. 2010;464(7285):59–65.

    CAS  PubMed Central  PubMed  Google Scholar 

  • Rajilic-Stojanovic M, Shanahan F, Guarner F, et al. Phylogenetic analysis of dysbiosis in ulcerative colitis during remission. Inflamm Bowel Dis. 2013;19(3):481–8.

    PubMed  Google Scholar 

  • Relman DA. The human microbiome: ecosystem resilience and health. Nutr Rev. 2012;70 Suppl 1:S2–9.

    PubMed Central  PubMed  Google Scholar 

  • Rooijers K, Kolmeder C, Juste C, et al. An iterative workflow for mining the human intestinal metaproteome. BMC Genomics. 2011;12:6.

    CAS  PubMed Central  PubMed  Google Scholar 

  • Swidsinski A, Dorffel Y, Loening-Baucke V, et al. Acute appendicitis is characterised by local invasion with Fusobacterium nucleatum/necrophorum. Gut. 2011;60(1):34–40.

    PubMed  Google Scholar 

  • Van den Abbeele P, Van de Wiele T, Verstraete W, et al. The host selects mucosal and luminal associations of coevolved gut microorganisms: a novel concept. FEMS Microbiol Rev. 2011;35(4):681–704.

    PubMed  Google Scholar 

  • van Passel MW, Kant R, Zoetendal EG, et al. The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes. PLoS ONE. 2011;6(3):e16876.

    PubMed Central  PubMed  Google Scholar 

  • Walter J, Ley R. The human gut microbiome: ecology and recent evolutionary changes. Annu Rev Microbiol. 2011;65:411–29.

    CAS  PubMed  Google Scholar 

  • Wang L, Christophersen CT, Sorich MJ, et al. Low relative abundances of the mucolytic bacterium Akkermansia muciniphila and Bifidobacterium spp. in feces of children with autism. Appl Environ Microbiol. 2011;77(18):6718–21.

    CAS  PubMed Central  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Clara Belzer .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2015 Springer Science+Business Media New York

About this entry

Cite this entry

Belzer, C., van Mark Passel, W.J., Smidt, H., de Vos, W.M. (2015). Comparative and Functional Metagenomics of Akkermansia muciniphila . In: Highlander, S.K., Rodriguez-Valera, F., White, B.A. (eds) Encyclopedia of Metagenomics. Springer, Boston, MA. https://doi.org/10.1007/978-1-4899-7475-4_793

Download citation

Publish with us

Policies and ethics