Synonyms
Crystallizer metagenome; Solar saltern metagenome
Definition
Here, “brine metagenome” is the metagenome (i.e., sum of genomes) of the microbes inhabiting the water from the different hypersaline ponds of solar salterns. These are artificial systems built to obtain salt from sea water for commercial purposes. Sometimes, the salterns are fed with halite deposits of ancient origin not currently connected to the sea.
Introduction
Multi-pond solar salterns are artificial systems constructed to concentrate salt from seawater. They consist of a series of interconnected ponds that are fed at the beginning of the circuit with seawater. As the seawater flows through the ponds, brines of different concentrations are produced, each inhabited by a different assemblage of microorganisms. The marine microbiota is replaced trough the circuit by halophiles and extreme halophiles. At the end of the circuit, the community is dominated by extremely halophilic Archaea and, to a minor extent, Bacteria...
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Cuadros-Orellana S, Martin-Cuadrado A, Legault B, D’Auria G, Zhaxybayeva O, Papke RT, et al. Genomic plasticity in prokaryotes: the case of the square haloarchaeon. ISME J. 2007;1(3):235–45.
Dinsdale EA, Edwards RA, Hall D, Angly F, Breitbart M, Brulc JM, et al. Functional metagenomic profiling of nine biomes. Nature. 2008;452(7187):629–32.
Ghai R, Pasic L, Fernandez AB, Martin-Cuadrado AB, Mizuno CM, McMahon KD, et al. New abundant microbial groups in aquatic hypersaline environments. Sci Rep. 2011;1:135.
Legault BA, Lopez-Lopez A, Alba-Casado JC, Doolittle WF, Bolhuis H, Rodriguez-Valera F, et al. Environmental genomics of “Haloquadratum walsbyi” in a saltern crystallizer indicates a large pool of accessory genes in an otherwise coherent species. BMC Genomics. 2006;7:171.
Narasingarao P, Podell S, Ugalde JA, Brochier-Armanet C, Emerson JB, Brocks JJ, et al. De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities. ISME J. 2012;6(1):81–93.
Pašić L, Rodriguez-Mueller B, Martin-Cuadrado A, Mira A, Rohwer F, Rodriguez-Valera F. Metagenomic islands of hyperhalophiles: the case of Salinibacter ruber. BMC Genomics. 2009;10:570.
Rodriguez-Brito B, Li L, Wegley L, Furlan M, Angly F, Breitbart M, et al. Viral and microbial community dynamics in four aquatic environments. ISME J. 2010;4(6):739–51.
Santos F, Yarza P, Parro V, Meseguer I, Rossello-Mora R, Anton J. Culture-independent approaches for studying viruses from hypersaline environments. Appl Environ Microbiol. 2012;78(6):1635–43.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer Science+Business Media New York
About this entry
Cite this entry
Anton, J., Martínez-García, M., Santos, F. (2015). Brine Pools, Metagenomics of. In: Highlander, S.K., Rodriguez-Valera, F., White, B.A. (eds) Encyclopedia of Metagenomics. Springer, Boston, MA. https://doi.org/10.1007/978-1-4899-7475-4_34
Download citation
DOI: https://doi.org/10.1007/978-1-4899-7475-4_34
Published:
Publisher Name: Springer, Boston, MA
Print ISBN: 978-1-4899-7474-7
Online ISBN: 978-1-4899-7475-4
eBook Packages: Biomedical and Life SciencesReference Module Biomedical and Life Sciences