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Process-based Model

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Synonyms

PBM; Functional model

Definition

A process-based model is the mathematical (and normally computer-based) representation of one or several processes characterizing the functioning of well-delimited biological systems of fundamental or economical interest. Examples include models of biochemical pathways or population dynamics models (single species or mixed). Usually, such models consist of a set of ordinary or partial differential equations that define the essence of each process (temporal patterns of key parameters), as well as their inputs and outputs, as a function of first principles (generic PBM) or else empirical knowledge (descriptive PBM). Outputs of one process can serve as input to other processes. Such a modeling paradigm was heavily employed in the case of crop modeling: A crop model describes the growth and development (phenology from germination to harvest) of a crop, at the level of the field, the canopy, or the plant (Goudriaan and van Laar 1994). In doing so,...

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References

  • Goudriaan J, van Laar HH (1994) Modelling potential crop growth processes. Kluwer Academic, Dordrecht, 239 p

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  • Yan HP, Kang MZ, de Reffye P, Dingkuhn M (2004) A dynamic, architectural plant model simulating resource-dependent growth. Ann Bot 93(5):591–602

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Correspondence to Gerhard Buck-Sorlin .

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Buck-Sorlin, G. (2013). Process-based Model. In: Dubitzky, W., Wolkenhauer, O., Cho, KH., Yokota, H. (eds) Encyclopedia of Systems Biology. Springer, New York, NY. https://doi.org/10.1007/978-1-4419-9863-7_1545

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