Definition
The Metropolis algorithm is a Monte Carlo method advanced by Metropolis et al. (1953) to generate samples from a prespecified target probability distribution. Originally, it was applied to investigate the statistical mechanics of fluids. By now, this method and its extensions are used for a wide range of problems in scientific computing (see, e.g., Liu (2004)). The basic idea is to simulate a Markov chain so that its stationary distribution is the target distribution.
Let \( {\mathbb {X}} \) be a discrete state space (finite or countable) on which the target probability distribution \(\pi = {\left( {{\pi_x}}\right)_{{x \in {\mathbb {X}}}}} \) is defined. It is assumed that \( {\pi_x}> 0,\;x \in {\mathbb {X}} \). Suppose that Q is a symmetric transition probability matrix, that is \( Q = {\left( {{q_{{xy}}}} \right)_{{x,y \in {\mathbb {X}}}}} \) with q xy ≥ 0, q xy = q yx , \( \sum\nolimits_{{y \in {\mathbb {X}}}} {{q_{{xy}}}} = 1,x,y \in {\mathbb {X}}\). The following...
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References
Liu JS (2004) Monte Carlo strategies in scientific computing. Springer, New York
Madras NN (2002) Lectures on Monte Carlo methods. Fields Institute monographs, American Mathematical Society, Providence
Metropolis N, Rosenbluth A, Rosenbluth M, Teller A, Teller E (1953) Equation of state calculations by fast computing machines. J Chem Phys 21:1087–1092
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Voss-Böhme, A. (2013). Metropolis Algorithm. In: Dubitzky, W., Wolkenhauer, O., Cho, KH., Yokota, H. (eds) Encyclopedia of Systems Biology. Springer, New York, NY. https://doi.org/10.1007/978-1-4419-9863-7_1115
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