Encyclopedia of Cancer

2017 Edition
| Editors: Manfred Schwab

Tumor Suppressor Genes

Reference work entry
DOI: https://doi.org/10.1007/978-3-662-46875-3_6057

Synonyms

Definition

Tumor suppressor genes are genes whose products normally negatively regulate cell growth or cell behavior (Fig. 1).
Tumor Suppressor Genes, Fig. 1

Chromosomal mechanisms for tumor suppressor gene inactivation. Left side, the first mutation (*) can occur in a single somatic cell and results in sporadic disease. Alternatively, it can occur in a germ cell (de novo mutation) or be inherited from an affected parent and results in heritable disease. Right side, the first mutation can become completely inactivated by (from top to bottom) physical deletion or recombination of the wild-type chromosome, by a targeted second mutation or deletion of the remaining wild-type gene, or by methylation of the promoter of the wild-type gene, leading to the loss of expression

Characteristics

The hallmark of a tumor suppressor gene is that its function is lost during tumor initiation or progression. This typically occurs by one of a set of chromosomal processes called loss of heterozygosity but, in some cases, can occur by forming dominant negative forms of the tumor suppressor gene product. Their presence is usually inferred through the cytogenetic or molecular detection of subchromosomal loss. Upon molecular isolation, the genetic inference can be confirmed and dissected by demonstrating a restoration of growth regulation upon ectopic expression of the gene and/or by the formation of tumors or growth abnormalities in animals lacking the functional gene, either naturally occurring mutant strains or those constructed by in vivo homologous recombination “gene knockout” techniques.

What Was the Evidence for Tumor Suppressors?

The primary lines of evidence are genetic: One is that specific kinds of cancer can cluster in families. In most cases, the inheritance pattern is autosomal dominant which means that it is not sex linked, may be transmitted from either parent, and involves the transmission of a gene whose presence is sufficient to cause disease. In addition to familial clustering of the common cancers, two additional clinical observations provide strong epidemiological support for the contention that cancer has a genetic etiology:
  • First, some individuals and their families have an autosomal dominant transmission of cancer predisposition, not to a single tumor but to multiple tumors occurring independently at different body sites.

  • Second, individuals with a variety of multi-organ developmental defects often also develop specific rare tumors. A statistical argument can thus be made that the combined occurrence of multiple independent tumors or the routine association of developmental defects with tumors which are very rare in the general population is so unlikely as to suggest an etiologic relationship.

The apparent dominant transmission of cancer traits is paradoxical in light of three observations. First, hybrid cells formed from the experimental fusion of highly malignant tumor cells with normal cells are not usually tumorigenic, suggesting that the normal phenotype is dominant in the presence of tumorigenic mutations. Furthermore, the occasional hybrid cell that regains tumorigenicity in these experiments has lost specific chromosomes originally contributed by the normal cell, implying that it is not gain of a dominant cancer trait but specific chromosomal loss that is responsible for the tumor phenotype. Second, if a single mutation was sufficient in itself to elicit a tumor, then families segregating for autosomal dominant forms of cancer would be expected to have no normal tissue in the diseased organ. This expectation is in direct contrast to the clinical description of these tumors as focal lesions surrounded by normal, functioning tissue of the same organ. Finally, epidemiological analyses of sporadic and familial forms of several human cancers have indicated that the conversion of a normal cell to a tumor cell requires multiple events.

Retinoblastoma: The First Suppressor

 Retinoblastoma is a relatively rare tumor (1 in 20,000 births) of young children and occurs in both a sporadic and autosomal dominant inherited form. Based entirely on statistical data from epidemiology and clinical observations, several remarkable conclusions were made regarding the nature of events, leading to retinoblastoma tumor formation. First, the inherited mutation alone was not sufficient to cause the disease, since there are at least 107 retinoblast cells which are potential targets for retinoblastomas, each carrying the inherited mutation, yet on average, only three independent tumors form per affected individual. This also suggested that at a genetic level, mutations leading to retinoblastoma may be recessive, rather than dominant as suggested by the inheritance pattern. The hereditary tumors were proposed to arise through an initial germline mutation followed by a second mutation in a somatic cell. The rate at which somatic mutations occurred was similar in hereditary and sporadic cases, although sporadic tumors required two somatic mutations, each in the same retinoblast for tumor formation. Entirely consistent with this was the observation that hereditary cases usually occurred at an earlier age, were often bilateral, and had multiple tumors, whereas the sporadic cases were invariably unilateral and single tumors. Because of the small possibility that a second somatic mutation may never occur in hereditary cases, ∼5% of carriers do not develop any tumor. The nature of the two mutational targets in the genome was unknown at the time of these clinical observations, but cytogenetics and molecular genetics eventually led to the answer as well as to a general approach to other human cancers.

Analysis of the chromosome band patterns from hereditary and sporadic retinoblastoma patients revealed a deletion of chromosome 13q14 (chromosome 13, q or long arm, band 1–4), suggesting that the gene for retinoblastoma (Rb) resided somewhere within this region. DNA from hereditary tumors was then analyzed with cloned DNA probes (termed “DNA markers”) that could distinguish the two copies, or alleles, of chromosome 13 within each cell. It was found that, in tumors of affected individuals, the region containing the suspected Rb gene on chromosome 13 was present in a mutant only state. This conversion from a heterozygous state to homozygosity for the mutation was termed loss of heterozygosity (LOH) and constituted the second hit required for tumor formation in hereditary cases. Furthermore, LOH on chromosome 13q14 also occurred in sporadic retinoblastoma. These data lent strong support to the idea that retinoblastoma tumor formation occurs by the unmasking of a recessive genetic defect. The discovery that LOH occurs in other hereditary and most sporadic cancers in humans marked the simultaneous emergence of somatic cell cancer genetics and its coupling to the genetics of hereditary cancer. By identifying the region of chromosome 13q14 with the most consistent LOH in tumor DNA, the gene responsible for retinoblastoma was eventually isolated and its functionality assessed. Most importantly, the gene was shown to be mutationally inactivated in retinoblastoma tumors. When a normal copy of the gene was transferred to tumor cells, their growth and tumorigenic behavior was reduced. Thus, the conjoint application of epidemiology, cytogenetics, molecular genetics, and molecular biology allows the identification of a gene with tumor-suppressing function.

Are There Other Tumor Suppressors and What Cellular Role Do They Normally Play?

Since the first suppressor was isolated, many others have been molecularly identified. As might be expected, these represent genes whose products are involved in many different aspects of cell growth and behavior. These include regulators of the cell cycle, growth and transcriptional regulators, DNA repair enzymes, differentiation factors, elements of cell  motility, and regulators of cellular signaling. Thus, elucidation of the function and nature of tumor suppressors is not only of importance for understanding cancer etiology but also useful for dissecting normal cellular function.

Clinical Relevance

The intimate involvement of tumor suppressor genes in the etiology of most human cancers places them at the center of cancer research. Such knowledge has been exploited for the first prenatal and premorbid predictions of cancer occurrence, for molecular pathology approaches to tumor subtyping, for  gene therapy approaches toward gene replacement, and as targets for agonist/antagonist development in rational drug design. Just as in research, the continued exploitation of tumor suppressor genes for clinical benefit to cancer patients is likely to assume a central role in modern therapies (Table 1).
Tumor Suppressor Genes, Table 1

Tumor suppressor genes, their primary biological functions and the types of tumors in which they have been found to be altered

Gene

Chromosomal location

Function

Cancer sites

RB1

13q14.2

Cell-cycle regulator

Retina, bone, bladder, breast, pancreas

p53

17p13.1

Genome-stability regulator

Brain, breast, leukemia, soft tissue

p16

9p21

Cyclin-dependent kinase inhibitor

Brain, melanocyte

p15

9p21

Cyclin-dependent kinase inhibitor

Leukemia

p18

1p32

Cyclin-dependent kinase inhibitor

Esophagus, lung, bladder, pancreas

  p21

6p21

Cyclin-dependent kinase inhibitor

Prostate, lung

E2F

20q11

Transcription factor

Erythroleukemia

BRCA1

17q21

Transcription factor

Breast, ovary

BRCA2

13q12–13

Transcription factor

Breast, ovary

WT1

11p13

Transcription factor

Kidney

VHL

3p25–26

Modulator of RNA polymerase

Kidney, central nervous system

PTCH

9q22.3

Transcription repressor

Skin

TGFβR1

9q33–34

TGF-β receptor

Colon, retina, liver, stomach

TGFβR2

3p21.3

TGF-β receptor

Colon, retina, liver, stomach

DPC4

18q21.1

TGF-β pathway growth inhibitor

Pancreas, colon, bladder, liver

CDH1

16q22.1

Intercellular adhesion

Breast, ovary, liver, skin, endometrium

APC

5q21

Cell signaling

Colon

MCC

5q21

Cell Adhesion

Colon

NF1

17q11.2

Cell signaling

Peripheral nervous system, skin

NF2

22q12

Cell signaling

Central nervous system

MSH2

2p22

Mismatch repair protein

Colon

MLH1

3p21.3

Mismatch repair protein

Colon

DCC

18q21

Differentiation factor

Colon

PTEN

10q23.3

Protein/lipid phosphatase

Brain, melanocytes, prostate, thyroid, breast

Cross-References

References

  1. Cavenee WK, White RL (1995) The genetic basis of cancer. Sci Am 272:50–57CrossRefGoogle Scholar
  2. Newsham I, Hadjistilianou D, Cavenee WK (1999) Retinoblastoma. In: Scriver CR, Beaudet AL, Sly WS, Valle D, Childs B, Vogelstein B (eds) The metabolic and molecular basis of inherited disease, 8th edn. McGraw-Hill, New YorkGoogle Scholar
  3. Perkins AS, Stern DF (1997) Molecular biology of cancer: oncogenes. In: DeVita VT, Hellman S, Rosenberg SA (eds) Cancer: principles and practice of oncology, 5th edn. Lippincott-Raven Publishers, PhiladelphiaGoogle Scholar

See Also

  1. (2012) Autosomal Dominant. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, p 323. doi:10.1007/978-3-642-16483-5_489Google Scholar
  2. (2012) Cell Cycle. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, p 737. doi:10.1007/978-3-642-16483-5_994Google Scholar
  3. (2012) Chromosome Band. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, p 848. doi:10.1007/978-3-642-16483-5_1147Google Scholar
  4. (2012) DCC. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, pp 1063–1064. doi:10.1007/978-3-642-16483-5_1524Google Scholar
  5. (2012) DNA Repair. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, p 1141. doi:10.1007/978-3-642-16483-5_1687Google Scholar
  6. (2012) Gene Knockout. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, p 1523. doi:10.1007/978-3-642-16483-5_2370Google Scholar
  7. (2012) Loss of Heterozygosity. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, pp 2075–2076. doi:10.1007/978-3-642-16483-5_3415Google Scholar
  8. (2012) P53. In: Schwab M (ed) Encyclopedia of Cancer, 3rd edn. Springer Berlin Heidelberg, p 2747. doi:10.1007/978-3-642-16483-5_4331Google Scholar

Copyright information

© Springer-Verlag Berlin Heidelberg 2017

Authors and Affiliations

  1. 1.Ludwig Institute for Cancer Research, UCSDLa JollaUSA