Abstract
While an individual is aging chronologically day-by-day irreversibly, the age of immune system might accelerate or decelerate. If we know the factors that affect the decline of immune responses, we might learn to predict and potentially delay immunosenescence, the stage at which the immune system stops properly respond to internal and external stressors. Here we aims to demonstrate that it is realistic and plausible to use immune responses to seasonal influenza as a measure of immunosenescence on both individual and population levels and from immunological and epidemiological points of view. This type of questions can be explored by combining experimental research, computational modeling, and data mining of big administrative databases of medical claims. At the molecular level, we observe that a memory immune response to flu becomes diverse upon repeated exposures to the virus, yet it can be modeled as a fractal self-similar system. Although each encounter with an infectious agent is unique for every person, the commonality in responses forms an “immunological kinship” among affected individuals. Our models indicate that at a certain point the continuing exposures to influenza begin to decrease the diversity of the response. At the population level, the responses to flu are diverse as well and such diversity allows us to make an inference to “immunological kinship” and “immunological age.” Using big data we quantified immunological age based on probability of severe complications to flu among 36M older adults residing in USA. We outlined the new directions for clinical, experimental, and epidemiological studies of immunosenescence.
References
Arias E (2002) United States life tables, 2000. Natl Vital Stat Rep 51(3):1–38
Arias E (2015) United States Life Tables, 2011. Natl Vital Stat Rep 64(11):1–63
Bak P, Chen K, Creutz M (1989) Self-organized criticality in the game of life. Nature 342(6251):780–782
Bak P, Tang C, Kt W (1987) Self-organized criticality: an explanation of the 1/f noise. Phys Rev Lett 59(4):381–384
Bak P, Tang C, Kt W (1988) Self-organized criticality. Phys Rev A 38(1):364–374
Barabasi AL, Gulbahce N, Loscalzo J (2011) Network medicine: a network-based approach to human disease. Nat Rev Genet 12(1):56–68. https://doi.org/10.1038/nrg2918
Barabasi AL, Oltvai ZN (2004) Network biology: understanding the cell's functional organization. Nat Rev Genet 5(2):101–113. https://doi.org/10.1038/nrg1272
Bax M (2001) Complete mondrian. Lund Humphries Surrey, UK
Blackman M, Kappler J, Marrack P (1990) The role of the T cell receptor in positive and negative selection of developing T cells. Science 248(4961):1335–1341
Boon AC, Fringuelli E, Graus YM, Fouchier RA, Sintnicolaas K, Iorio AM, Rimmelzwaan GF, Osterhaus AD (2002) Influenza A virus specific T cell immunity in humans during aging. Virology 299(1):100–108
Busch DH, Pamer EG (1999) T cell affinity maturation by selective expansion during infection. J Exp Med 189(4):701–710
Cai L, Lubitz J (2007) Was there compression of disability for older Americans from 1992 to 2003? Demography 44(3):479–495
Carlson JM, Doyle J (1999) Highly optimized tolerance: a mechanism for power laws in designed systems. Phys Rev E 60(2):1412
Carlson JM, Doyle J (2000) Highly optimized tolerance: robustness and design in complex systems. Phys Rev Lett 84(11):2529
Castilla J, Martinez-Baz I, Martinez-Artola V, Reina G, Pozo F, Garcia Cenoz M, Guevara M, Moran J, Irisarri F, Arriazu M, Albeniz E, Ezpeleta C, Barricarte A, Primary Health Care Sentinel Network, Network for Influenza Surveillance in Hospitals of Navarre (2013) Decline in influenza vaccine effectiveness with time after vaccination, Navarre, Spain, season 2011/12. Euro Surveill 18(5)
Chao A (1984) Nonparametric estimation of the number of classes in a population. Scand J Stat 11(4):265–270
Chao A (1987) Estimating the population size for capture-recapture data with unequal catchability. Biometrics 43(4):783–791
Cohen SA, Naumova EN (2007) Population dynamics in the elderly: The need for age-adjustment in national BioSurveillance systems, Lecture notes in computer science (including subseries lecture notes in artificial intelligence and lecture notes in bioinformatics), vol 4506. LNCS, New Brunswick
Cooksley CD, Avritscher EB, Bekele BN, Rolston KV, Geraci JM, Elting LS (2005) Epidemiology and outcomes of serious influenza-related infections in the cancer population. Cancer 104(3):618–628. https://doi.org/10.1002/cncr.21203
Crimmins EM (2004) Trends in the health of the elderly. Annu Rev Public Health 25:79–98. https://doi.org/10.1146/annurev.publhealth.25.102802.124401
Davenport MP, Fazou C, McMichael AJ, Callan MF (2002) Clonal selection, clonal senescence, and clonal succession: the evolution of the T cell response to infection with a persistent virus. J Immunol 168(7):3309–3317
Deng Y, Jing Y, Campbell AE, Gravenstein S (2004) Age-related impaired type 1 T cell responses to influenza: reduced activation ex vivo, decreased expansion in CTL culture in vitro, and blunted response to influenza vaccination in vivo in the elderly. J Immunol 172(6):3437–3446
Donatelli I, Castrucci MR, De Marco MA, Delogu M, Webster RG (2016) Human-animal interface: the case for influenza interspecies transmission. Adv Exp Med Biol. https://doi.org/10.1007/5584_2016_136
Elixhauser A, Steiner C, Harris DR, Coffey RM (1998) Comorbidity measures for use with administrative data. Med Care 36(1):8–27
Farber DL, Yudanin NA, Restifo NP (2014) Human memory T cells: generation, compartmentalization and homeostasis. Nat Rev Immunol 14(1):24–35. https://doi.org/10.1038/nri3567
Ferguson NM, Galvani AP, Bush RM (2003) Ecological and immunological determinants of influenza evolution. Nature 422(6930):428–433. https://doi.org/10.1038/nature01509
Fineberg HV (2014) Pandemic preparedness and response — lessons from the H1N1 influenza of 2009. New Engl J Med 370(14):1335–1342. https://doi.org/10.1056/NEJMra1208802
Fiscella K, Dressler R, Meldrum S, Holt K (2007) Impact of influenza vaccination disparities on elderly mortality in the United States. Prev Med 45(1):83–87. https://doi.org/10.1016/j.ypmed.2007.03.007
Fitch WM, Bush RM, Bender CA, Cox NJ (1997) Long term trends in the evolution of H(3) HA1 human influenza type A. Proc Natl Acad Sci U S A 94(15):7712–7718
Franceschi C, Bonafe M, Valensin S (2000) Human immunosenescence: the prevailing of innate immunity, the failing of clonotypic immunity, and the filling of immunological space. Vaccine 18(16):1717–1720
Frey W (2010) Baby boomers and the new demographics of America’s seniors. Generations 34(3):28–37
Fries JF (1983) The compression of morbidity. Milbank Mem Fund Q Health Soc 61(3):397–419
Gladwell M (2006) The tipping point: how little things can make a big difference. Little, Brown, London
Gotch F, McMichael A, Smith G, Moss B (1987) Identification of viral molecules recognized by influenza-specific human cytotoxic T lymphocytes. J Exp Med 165(2):408–416
Gotch F, Rothbard J, Howland K, Townsend A, McMichael A (1987) Cytotoxic T lymphocytes recognize a fragment of influenza virus matrix protein in association with HLA-A2. Nature 326(6116):881–882. https://doi.org/10.1038/326881a0
Grakoui A, Bromley SK, Sumen C, Davis MM, Shaw AS, Allen PM, Dustin ML (1999) The immunological synapse: a molecular machine controlling T cell activation. Science 285(5425):221–227
Grohskopf LA, Sokolow LZ, Olsen SJ, Bresee JS, Broder KR, Karron RA (2015) Prevention and control of influenza with vaccines: recommendations of the advisory committee on immunization practices, United States, 2015-16 influenza season. MMWR Morb Mortal Wkly Rep 64(30):818–825
Grover SA, Kaouache M, Rempel P, Joseph L, Dawes M, Lau DC, Lowensteyn I (2015) Years of life lost and healthy life-years lost from diabetes and cardiovascular disease in overweight and obese people: a modelling study. Lancet Diabetes Endocrinol 3(2):114–122. https://doi.org/10.1016/S2213-8587(14)70229-3
Gruenberg EM (1977) The failures of success. Milbank Mem Fund Q Health Soc 55(1):3–24
Hessler RM, Eriksson BG, Dey D, Steen G, Sundh V, Steen B (2003) The compression of morbidity debate in aging: an empirical test using the gerontological and geriatric population studies in Goteborg, Sweden (H70). Arch Gerontol Geriatr 37(3):213–222
Hill BM (1974) The rank-frequency form of Zipf's Law. J Am Stat Assoc 69(348):1017–1026. https://doi.org/10.1080/01621459.1974.10480247
Hollander GA, Krenger W, Blazar BR (2010) Emerging strategies to boost thymic function. Curr Opin Pharmacol 10(4):443–453. https://doi.org/10.1016/j.coph.2010.04.008
Kedl RM, Rees WA, Hildeman DA, Schaefer B, Mitchell T, Kappler J, Marrack P (2000) T cells compete for access to antigen-bearing antigen-presenting cells. J Exp Med 192(8):1105–1113
Kucharski AJ, Lessler J, Read JM, Zhu H, Jiang CQ, Guan Y, Cummings DA, Riley S (2015) Estimating the life course of influenza A(H3N2) antibody responses from cross-sectional data. PLoS Biol 13(3):e1002082. https://doi.org/10.1371/journal.pbio.1002082
Ladislas R (2000) Cellular and molecular mechanisms of aging and age related diseases. Pathol Oncol Res 6(1):3–9
Lawson TM, Man S, Wang EC, Williams S, Amos N, Gillespie GM, Moss PA, Borysiewicz LK (2001) Functional differences between influenza A-specific cytotoxic T lymphocyte clones expressing dominant and subdominant TCR. Int Immunol 13(11):1383–1390
Lawson TM, Man S, Williams S, Boon AC, Zambon M, Borysiewicz LK (2001) Influenza A antigen exposure selects dominant Vbeta17+ TCR in human CD8+ cytotoxic T cell responses. Int Immunol 13(11):1373–1381
Lee KH, Dinner AR, Tu C, Campi G, Raychaudhuri S, Varma R, Sims TN, Burack WR, Wu H, Wang J, Kanagawa O, Markiewicz M, Allen PM, Dustin ML, Chakraborty AK, Shaw AS (2003) The immunological synapse balances T cell receptor signaling and degradation. Science 302(5648):1218–1222
Lehner PJ, Wang EC, Moss PA, Williams S, Platt K, Friedman SM, Bell JI, Borysiewicz LK (1995) Human HLA-A0201-restricted cytotoxic T lymphocyte recognition of influenza A is dominated by T cells bearing the V beta 17 gene segment. J Exp Med 181(1):79–91
Leung MY, Pollack LM, Colditz GA, Chang SH (2015) Life years lost and lifetime health care expenditures associated with diabetes in the U.S., National Health Interview Survey, 1997-2000. Diabetes Care 38(3):460–468. https://doi.org/10.2337/dc14-1453
Li XL, Teng MK, Reinherz EL, Wang JH (2013) Strict major histocompatibility complex molecule class-specific binding by co-receptors enforces MHC-restricted alphabeta TCR recognition during T lineage subset commitment. Front Immunol 4:383. https://doi.org/10.3389/fimmu.2013.00383
Lofgren E, Fefferman NH, Naumov YN, Gorski J, Naumova EN (2007) Influenza seasonality: underlying causes and modeling theories. J Virol 81(11):5429–5436. https://doi.org/10.1128/JVI.01680-06
Lofgren ET, Wenger JB, Fefferman NH, Bina D, Gradus S, Bhattacharyya S, Naumov YN, Gorski J, Naumova EN (2010) Disproportional effects in populations of concern for pandemic influenza: insights from seasonal epidemics in Wisconsin, 1967-2004. Influenza Other Respir Viruses (4, 4):205–212. https://doi.org/10.1111/j.1750-2659.2010.00137.x
Lopez-Otin C, Blasco MA, Partridge L, Serrano M, Kroemer G (2013) The hallmarks of aging. Cell 153(6):1194–1217. https://doi.org/10.1016/j.cell.2013.05.039
López-Otín C, Galluzzi L, Freije JMP, Madeo F, Kroemer G (2016) Metabolic control of longevity. Cell 166(4):802–821. https://doi.org/10.1016/j.cell.2016.07.031
Lynch HE, Goldberg GL, Chidgey A, Van den Brink MR, Boyd R, Sempowski GD (2009) Thymic involution and immune reconstitution. Trends Immunol 30(7):366–373. https://doi.org/10.1016/j.it.2009.04.003
Magurran AE (2003) Measuring biological diversity. Wiley-Blackwell, Hoboken
Manton KG (1982) Changing concepts of morbidity and mortality in the elderly population. Milbank Mem Fund Q Health Soc 60(2):183–244
Margalef R (1951) Diversidad de especies en les communidades naturales. Publ Instit Biol Apll Barcelonia, 9:15–27
May RM (1975) Pattern of species abundance and diversity. In: Cody ML, Diamond JM (eds) Ecology and evolution of communities. Harvard University Press, Cambridge, MA, pp 81–120
Mayya V, Dustin ML (2016) What scales the T cell response? Trends Immunol 37(8):513–522. https://doi.org/10.1016/j.it.2016.06.005
Menhinick EF (1964) A comparison of some species-individuals diversity indices applied to samples of field insects. Ecology 45(4):859–861
Mercado R, Vijh S, Allen SE, Kerksiek K, Pilip IM, Pamer EG (2000) Early programming of T cell populations responding to bacterial infection. J Immunol 165(12):6833–6839
Michie AM, Zuniga-Pflucker JC (2002) Regulation of thymocyte differentiation: pre-TCR signals and beta-selection. Semin Immunol 14(5):311–323
Miller RA (1996) The aging immune system: primer and prospectus. Science 273(5271):70–74
Moorthy M, Castronovo D, Abraham A, Bhattacharyya S, Gradus S, Gorski J, Naumov YN, Fefferman NH, Naumova EN (2012) Deviations in influenza seasonality: odd coincidence or obscure consequence? Clin Microbiol Infect 18(10):955–962. https://doi.org/10.1111/j.1469-0691.2012.03959.x
Mor SM, Aminawung JA, Demaria A, Jr., Naumova EN (2011) Pneumonia and influenza hospitalization in HIV-positive seniors. Epidemiol Infect 139 (9):1317-1325. doi:https://doi.org/10.1017/S0950268810002669
Moss PA, Moots RJ, Rosenberg WM, Rowland-Jones SJ, Bodmer HC, McMichael AJ, Bell JI (1991) Extensive conservation of alpha and beta chains of the human T-cell antigen receptor recognizing HLA-A2 and influenza A matrix peptide. Proc Natl Acad Sci U S A 88(20):8987–8990
Nakajima PB, Menetski JP, Roth DB, Gellert M, Bosma MJ (1995) V-D-J rearrangements at the T cell receptor delta locus in mouse thymocytes of the alpha beta lineage. Immunity 3(5):609–621
Naumov YN, Hogan KT, Naumova EN, Pagel JT, Gorski J (1998) A class I MHC-restricted recall response to a viral peptide is highly polyclonal despite stringent CDR3 selection: implications for establishing memory T cell repertoires in “real-world” conditions. J Immunol 160(6):2842–2852
Naumov YN, Naumova EN, Hogan KT, Selin LK, Gorski J (2003) A fractal clonotype distribution in the CD8+ memory T cell repertoire could optimize potential for immune responses. J Immunol 170(8):3994–4001
Naumov YN, Naumova EN, Yassai MB, Gorski J (2011) Selective T cell expansion during aging of CD8 memory repertoires to influenza revealed by modeling. J Immunol 186(11):6617–6624. https://doi.org/10.4049/jimmunol.1100091
Naumova EN, Gorski J, Naumov YN (2008) Simulation studies for a multistage dynamic process of immune memory response to influenza: experiment in silico. Ann Zool Fenn 45(5):369–384. https://doi.org/10.5735/086.045.0502
Naumova EN, Gorski J, Naumov YN (2009) Two compensatory pathways maintain long-term stability and diversity in CD8 T cell memory repertoires. J Immunol 183(4):2851–2858. https://doi.org/10.4049/jimmunol.0900162
Naumova EN, Must A, Laird NM (2001) Tutorial in biostatistics: evaluating the impact of 'critical periods' in longitudinal studies of growth using piecewise mixed effects models. Int J Epidemiol 30(6):1332–1341
Naumova EN, Parisi SM, Castronovo D, Pandita M, Wenger J, Minihan P (2009) Pneumonia and influenza hospitalizations in elderly people with dementia. J Am Geriatr Soc 57(12):2192–2199. https://doi.org/10.1111/j.1532-5415.2009.02565.x
Naylor K, Li G, Vallejo AN, Lee WW, Koetz K, Bryl E, Witkowski J, Fulbright J, Weyand CM, Goronzy JJ (2005) The influence of age on T cell generation and TCR diversity. J Immunol 174(11):7446–7452
Oeppen J, Vaupel JW (2002) Demography. Broken limits to life expectancy. Science 296(5570):1029–1031. https://doi.org/10.1126/science.1069675
Olshansky SJ, Passaro DJ, Hershow RC, Layden J, Carnes BA, Brody J, Hayflick L, Butler RN, Allison DB, Ludwig DS (2005) A potential decline in life expectancy in the United States in the 21st century. N Engl J Med 352(11):1138–1145. https://doi.org/10.1056/NEJMsr043743
Olshansky SJ, Rudberg MA, Carnes BA, Cassel CK, Brody JA (1991) Trading off longer life for worsening health: the expansion of morbidity hypothesis. J Aging Health 3(2):194–216. https://doi.org/10.1177/089826439100300205
Padovan E, Casorati G, Dellabona P, Meyer S, Brockhaus M, Lanzavecchia A (1993) Expression of two T cell receptor alpha chains: dual receptor T cells. Science 262(5132):422–424
Pardoll DM (2012) The blockade of immune checkpoints in cancer immunotherapy. Nat Rev Cancer 12(4):252–264. https://doi.org/10.1038/nrc3239
Pauken KE, Nelson CE, Martinov T, Spanier JA, Heffernan JR, Sahli NL, Quarnstrom CF, Osum KC, Schenkel JM, Jenkins MK, Blazar BR, Vezys V, Fife BT (2015) Cutting edge: identification of autoreactive CD4+ and CD8+ T cell subsets resistant to PD-1 pathway blockade. J Immunol 194(8):3551–3555. https://doi.org/10.4049/jimmunol.1402262
Pewe L, Heard SB, Bergmann C, Dailey MO, Perlman S (1999) Selection of CTL escape mutants in mice infected with a neurotropic coronavirus: quantitative estimate of TCR diversity in the infected central nervous system. J Immunol 163(11):6106–6113
Pita-Lopez ML, Gayoso I, DelaRosa O, Casado JG, Alonso C, Muñoz-Gomariz E, Tarazona R, Solana R (2009) Effect of ageing on CMV-specific CD8 T cells from CMV seropositive healthy donors. Immun Ageing 6(1):11. https://doi.org/10.1186/1742-4933-6-11
Rempala GA, Seweryn M (2013) Methods for diversity and overlap analysis in T-cell receptor populations. J Math Biol 67(6-7):1339–1368. https://doi.org/10.1007/s00285-012-0589-7
Rempala GA, Seweryn M, L. Ignatowicz (2010) Model for diversity analysis of antigen receptor repertoires. arXiv:10031066 [q-bioBM]
Ribeiro RM, Perelson AS (2007) Determining thymic output quantitatively: using models to interpret experimental T-cell receptor excision circle (TREC) data. Immunol Rev 216:21–34. https://doi.org/10.1111/j.1600-065X.2006.00493.x
Rogerson PA, Kim D (2005) Population distribution and redistribution of the baby-boom cohort in the United States: recent trends and implications. Proc Natl Acad Sci U S A 102(43):15319–15324. https://doi.org/10.1073/pnas.0507318102
Romanyukha AA, Yashin AI (2003) Age related changes in population of peripheral T cells: towards a model of immunosenescence. Mech Ageing Dev 124(4):433–443
Rosenkranz D, Weyer S, Tolosa E, Gaenslen A, Berg D, Leyhe T, Gasser T, Stoltze L (2007) Higher frequency of regulatory T cells in the elderly and increased suppressive activity in neurodegeneration. J Neuroimmunol 188(1):117–127. https://doi.org/10.1016/j.jneuroim.2007.05.011
Rothberg MB, Haessler SD, Brown RB (2008) Complications of viral influenza. Am J Med 121(4):258–264. https://doi.org/10.1016/j.amjmed.2007.10.040
Salomon JA, Wang H, Freeman MK, Vos T, Flaxman AD, Lopez AD, Murray CJ (2012) Healthy life expectancy for 187 countries, 1990-2010: a systematic analysis for the Global Burden Disease Study 2010. Lancet 380(9859):2144–2162. https://doi.org/10.1016/S0140-6736(12)61690-0
Scheffer M, Bascompte J, Brock WA, Brovkin V, Carpenter SR, Dakos V, Held H, van Nes EH, Rietkerk M, Sugihara G (2009) Early-warning signals for critical transitions. Nature 461(7260):53–59
Sen P, Shah Parisha P, Nativio R, Berger Shelley L (2016) Epigenetic mechanisms of longevity and aging. Cell 166(4):822–839. https://doi.org/10.1016/j.cell.2016.07.050
Shannon CE (1949) Communication theory of secrecy systems. Bell Syst Tech J 28(4):656–715
Simonsen L, Reichert TA, Viboud C, Blackwelder WC, Taylor RJ, Miller MA (2005) Impact of influenza vaccination on seasonal mortality in the US elderly population. Arch Intern Med 165(3):265–272. https://doi.org/10.1001/archinte.165.3.265
Skowronski DM, Tweed SA, De Serres G (2008) Rapid decline of influenza vaccine-induced antibody in the elderly: is it real, or is it relevant? J Infect Dis 197(4):490–502. https://doi.org/10.1086/524146
Smith DJ, Lapedes AS, de Jong JC, Bestebroer TM, Rimmelzwaan GF, Osterhaus ADME, Fouchier RAM (2004) mapping the antigenic and genetic evolution of influenza virus. Science 305(5682):371–376. https://doi.org/10.1126/science.1097211
Song JY, Cheong HJ, Hwang IS, Choi WS, Jo YM, Park DW, Cho GJ, Hwang TG, Kim WJ (2010) Long-term immunogenicity of influenza vaccine among the elderly: risk factors for poor immune response and persistence. Vaccine 28(23):3929–3935. https://doi.org/10.1016/j.vaccine.2010.03.067
Sornette D (2006) Critical phenomena in natural sciences : chaos, fractals, selforganization, and disorder: concepts and tools, Springer series in synergetics, 2nd edn. Springer, Berlin, New York
Thompson WW, Shay DK, Weintraub E, Brammer L, Cox N, Anderson LJ, Fukuda K (2003) Mortality associated with influenza and respiratory syncytial virus in the United States. JAMA 289(2):179–186
Voordouw BC, van der Linden PD, Simonian S, van der Lei J, Sturkenboom MC, Stricker BH (2003) Influenza vaccination in community-dwelling elderly: impact on mortality and influenza-associated morbidity. Arch Intern Med 163(9):1089–1094. https://doi.org/10.1001/archinte.163.9.1089
Wasserman S, Faust K (1994) Social network analysis: methods and applications, vol 8. Cambridge university press
Weinstock DM, Eagan J, Malak SA, Rogers M, Wallace H, Kiehn TE, Sepkowitz KA (2000) Control of influenza A on a bone marrow transplant unit. Infect Control Hosp Epidemiol 21(11):730–732. https://doi.org/10.1086/501726
Wenger JB, Naumova EN (2010) Seasonal synchronization of influenza in the United States older adult population. PLoS One 5(4):e10187. https://doi.org/10.1371/journal.pone.0010187
Wick G, Grubeck-Loebenstein B (1997) The aging immune system: primary and secondary alterations of immune reactivity in the elderly. Exp Gerontol 32(4–5):401–413
Wikby A, Johansson B, Ferguson F, Olsson J (1994) Age-related changes in immune parameters in a very old population of Swedish people: a longitudinal study. Exp Gerontol 29(5):531–541
Wikby A, Johansson B, Olsson J, Lofgren S, Nilsson BO, Ferguson F (2002) Expansions of peripheral blood CD8 T-lymphocyte subpopulations and an association with cytomegalovirus seropositivity in the elderly: the Swedish NONA immune study. Exp Gerontol 37(2-3):445–453
Xiong Y, Bosselut R (2012) CD4-CD8 differentiation in the thymus: connecting circuits and building memories. Curr Opin Immunol 24(2):139–145. https://doi.org/10.1016/j.coi.2012.02.002
Yassai M, Bosenko D, Unruh M, Zacharias G, Reed E, Demos W, Ferrante A, Gorski J (2011) Naive T cell repertoire skewing in HLA-A2 individuals by a specialized rearrangement mechanism results in public memory clonotypes. J Immunol 186(5):2970–2977. https://doi.org/10.4049/jimmunol.1002764
Yassai MB, Demos W, Gorski J (2016) CDR3 motif generation and selection in the BV19-utilizing subset of the human CD8 T cell repertoire. Mol Immunol 72:57–64. https://doi.org/10.1016/j.molimm.2016.02.014
Yassai MB, Demos W, Janczak T, Naumova EN, Gorski J (2016) CDR3 clonotype and amino acid motif diversity of BV19 expressing circulating human CD8 T cells. Hum Immunol 77(1):137–145. https://doi.org/10.1016/j.humimm.2015.11.007
Yassai MB, Naumov YN, Naumova EN, Gorski J (2009) A clonotype nomenclature for T cell receptors. Immunogenetics 61(7):493–502. https://doi.org/10.1007/s00251-009-0383-x
Yewdell JW, Bennink JR (1999) Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses. Annu Rev Immunol 17:51–88. https://doi.org/10.1146/annurev.immunol.17.1.51
Zhou V, Yassai MB, Regunathan J, Box J, Bosenko D, Vashishath Y, Demos W, Lee F, Gorski J (2013) The functional CD8 T cell memory recall repertoire responding to the influenza A M1(58-66) epitope is polyclonal and shows a complex clonotype distribution. Hum Immunol 74(7):809–817. https://doi.org/10.1016/j.humimm.2012.12.016
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Naumova, E.N., Naumov, Y.N., Gorski, J. (2018). Measuring Immunological Age: From T cell Repertoires to Populations. In: Fulop, T., Franceschi, C., Hirokawa, K., Pawelec, G. (eds) Handbook of Immunosenescence. Springer, Cham. https://doi.org/10.1007/978-3-319-64597-1_171-1
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Measuring Immunological Age: From T Cell Repertoires to Populations- Published:
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DOI: https://doi.org/10.1007/978-3-319-64597-1_171-2
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DOI: https://doi.org/10.1007/978-3-319-64597-1_171-1