Encyclopedia of Database Systems

2018 Edition
| Editors: Ling Liu, M. Tamer Özsu

Biological Metadata Management

  • Zoé Lacroix
  • Cartik R. Kothari
  • Peter Mork
  • Mark D. Wilkinson
  • Sarah Cohen-Boulakia
Reference work entry
DOI: https://doi.org/10.1007/978-1-4614-8265-9_628

Definition

Metadata characterize biological resources by core information including a name, a description of its input and its output (parameters or format), its address, and various additional properties. Resources are organized with respect to metadata that characterize their content (for data sources), their semantics (in terms of ontological classes and relationships), their characteristics (syntactical properties), their performance (with metrics and benchmarks), their quality (curation, reliability, trust), etc.

Historical Background

Digital resources for the Life Sciences include a variety of data sources and applications whose number increases dramatically every year [4]. Although this rich and valuable offering provides scientists with multiple options to implement and execute their scientific protocols (i.e., pipelines, dataflows, workflows), selecting the resources suitable for implementing each scientific step remains a difficult task. Scientific protocols are typically...

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Recommended Reading

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Copyright information

© Springer Science+Business Media, LLC, part of Springer Nature 2018

Authors and Affiliations

  • Zoé Lacroix
    • 1
  • Cartik R. Kothari
    • 2
  • Peter Mork
    • 3
  • Mark D. Wilkinson
    • 4
  • Sarah Cohen-Boulakia
    • 5
  1. 1.Arizona State UniversityTempeUSA
  2. 2.Biomedical InformaticsOhio State University, College of MedicineColumbusUSA
  3. 3.The MITRE CorporationMcLeanUSA
  4. 4.University of British ColumbiaVancouverCanada
  5. 5.University Paris-SudOrsay CedexFrance

Section editors and affiliations

  • Louiqa Raschid
    • 1
  1. 1.Robert H. Smith School of BusinessUniversity of MarylandCollege ParkUSA