Encyclopedia of Algorithms

Editors: Ming-Yang Kao

Directed Perfect Phylogeny (Binary Characters)

1991; Gusfield
  • Jesper Jansson
Reference work entry
DOI: https://doi.org/10.1007/978-0-387-30162-4_112

Keywords and Synonyms

Directed binary character compatibility          

Problem Definition

Let \( { S = \{s_1,s_2,\dots,s_n\} } \)

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Notes

Acknowledgments

Supported in part by Kyushu University, JSPS (Japan Society for the Promotion of Science), and INRIA Lille - Nord Europe.

Recommended Reading

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    Estabrook, G.F., Johnson, C.S., Jr., McMorris, F.R.: A mathematical foundation for the analysis of cladistic character compatibility. Math. Biosci. 29, 181–187 (1976)MathSciNetMATHGoogle Scholar
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    Felsenstein, J.: Inferring Phylogenies. Sinauer Associates, Inc., Sunderland (2004)Google Scholar
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    Gusfield, D.M.: Efficient algorithms for inferring evolutionary trees. Networks 21, 19–28 (1991)MathSciNetMATHGoogle Scholar
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    Kanj, I.A., Nakhleh, L., Xia, G.: Reconstructing evolution of natural languages: Complexity and parametrized algorithms. In: Proceedings of the 12th Annual International Computing and Combinatorics Conference (COCOON 2006). Lecture Notes in Computer Science, vol. 4112, pp. 299–308. Springer, Berlin (2006)Google Scholar
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    McMorris, F.R.: On the compatibility of binary qualitative taxonomic characters. Bull. Math. Biol. 39, 133–138 (1977)MathSciNetMATHGoogle Scholar
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Copyright information

© Springer-Verlag 2008

Authors and Affiliations

  • Jesper Jansson
    • 1
  1. 1.Ochanomizu UniversityTokyoJapan