Abstract
The detailed characterization of complex protein mixtures like samples from biological sources cannot be sufficiently performed by separation of polypeptides accordingly to their molecular weight as is done by conventional sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (1DE). For analysis of such samples, two-dimensional gel electrophoresis (2DE) is the preferable methodological approach, since it combines separation of polypeptides according to isoelectric properties and molecular weight as well. The resulting pattern of protein spots does not only provide information on composition of samples due to the complexity of a mixture of polypeptides. It delivers also a picture on the microheterogenity of polypeptides caused by posttranslational modifications. These might be of natural or artificial type and occur during biosynthetic processing of a polypeptide or within industrial scale production.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Rabilloud T. (1999) Solubilization of proteins in 2-D electrophoresis: an outline. Methods Mol. Biol. 112, 9–19.
Rabilloud T. (1998) Use of thiourea to increase the solubility of membrane proteins in two-dimensional electrophoresis. Electrophoresis 19, 758–760.
Uchida Y., Tsukada Y., and Sugimori T. J. (1979) Enzymatic properties of neuraminidases from Arthrobacter ureafaciens. Biochemistry (Tokyo) 86, 1573–1585.
Shibuya N., Goldstein I. J., Broekaert W. F., Nsimba-Lubaki M., Peeters B., and Peumans W. J. (1987) The elderberry (Sambucus nigra L.) bark lectin recognizes the Neu5Ac (alpha 2-6)Gal/GalNAc sequence. J. Biol. Chem. 262, 1596–1601.
Crowley J. F., Goldstein I. L., Arnarp J., and Loogren J. (1984) Carbohydrate binding studies on the lectin from Datura stramonium seeds. Arch. Biochem. Biophys. 231, 524–533.
Tarentino A. L., Gomez C. M., and Plummer T. H. Jr. (1985) Deglycosylation of asparagine-linked glycans by peptide N-glycosidase F. Biochemistry 24, 4665–4671.
Endo Y. and Kobata A. J. (1976) Partial purification and characterization of an endo-alpha-N-acetylgalactosaminidase from the culture of medium of Diplococcus pneumoniae. Biochemistry (Tokyo) 80, 1–8.
Scudder P., Hanfland P., Uemura K., and Feizi T. (1984) Endo-beta-D-galactosidases of Bacteroides fragilis and Escherichia freundii hydrolyze linear but not branched oligosaccharide domains of glycolipids of the neolacto series. J. Biol. Chem. 259, 6586–6592.
Sojar H. T. and Bahl O. P. (1987) A chemical method for the deglycosylation of proteins. Arch. Biochem. Biophys. 259, 52–57.
Blum H., Beier H., and Gross H. J. (1987) Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels. Electrophoresis 8, 93–99.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2002 Humana Press Inc.
About this protocol
Cite this protocol
Löster, K., Kannicht, C. (2002). 2D-Electrophoresis: Detection of Glycosylation and Influence on Spot Pattern . In: Kannicht, C. (eds) Posttranslational Modifications of Proteins. Methods in Molecular Biology™, vol 194. Humana Press. https://doi.org/10.1385/1-59259-181-7:301
Download citation
DOI: https://doi.org/10.1385/1-59259-181-7:301
Publisher Name: Humana Press
Print ISBN: 978-0-89603-678-9
Online ISBN: 978-1-59259-181-7
eBook Packages: Springer Protocols