Skip to main content

2D-Electrophoresis: Detection of Glycosylation and Influence on Spot Pattern

  • Protocol
Posttranslational Modifications of Proteins

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 194))

Abstract

The detailed characterization of complex protein mixtures like samples from biological sources cannot be sufficiently performed by separation of polypeptides accordingly to their molecular weight as is done by conventional sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (1DE). For analysis of such samples, two-dimensional gel electrophoresis (2DE) is the preferable methodological approach, since it combines separation of polypeptides according to isoelectric properties and molecular weight as well. The resulting pattern of protein spots does not only provide information on composition of samples due to the complexity of a mixture of polypeptides. It delivers also a picture on the microheterogenity of polypeptides caused by posttranslational modifications. These might be of natural or artificial type and occur during biosynthetic processing of a polypeptide or within industrial scale production.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Rabilloud T. (1999) Solubilization of proteins in 2-D electrophoresis: an outline. Methods Mol. Biol. 112, 9–19.

    CAS  PubMed  Google Scholar 

  2. Rabilloud T. (1998) Use of thiourea to increase the solubility of membrane proteins in two-dimensional electrophoresis. Electrophoresis 19, 758–760.

    Article  CAS  PubMed  Google Scholar 

  3. Uchida Y., Tsukada Y., and Sugimori T. J. (1979) Enzymatic properties of neuraminidases from Arthrobacter ureafaciens. Biochemistry (Tokyo) 86, 1573–1585.

    CAS  Google Scholar 

  4. Shibuya N., Goldstein I. J., Broekaert W. F., Nsimba-Lubaki M., Peeters B., and Peumans W. J. (1987) The elderberry (Sambucus nigra L.) bark lectin recognizes the Neu5Ac (alpha 2-6)Gal/GalNAc sequence. J. Biol. Chem. 262, 1596–1601.

    CAS  PubMed  Google Scholar 

  5. Crowley J. F., Goldstein I. L., Arnarp J., and Loogren J. (1984) Carbohydrate binding studies on the lectin from Datura stramonium seeds. Arch. Biochem. Biophys. 231, 524–533.

    Article  CAS  PubMed  Google Scholar 

  6. Tarentino A. L., Gomez C. M., and Plummer T. H. Jr. (1985) Deglycosylation of asparagine-linked glycans by peptide N-glycosidase F. Biochemistry 24, 4665–4671.

    Article  CAS  PubMed  Google Scholar 

  7. Endo Y. and Kobata A. J. (1976) Partial purification and characterization of an endo-alpha-N-acetylgalactosaminidase from the culture of medium of Diplococcus pneumoniae. Biochemistry (Tokyo) 80, 1–8.

    CAS  Google Scholar 

  8. Scudder P., Hanfland P., Uemura K., and Feizi T. (1984) Endo-beta-D-galactosidases of Bacteroides fragilis and Escherichia freundii hydrolyze linear but not branched oligosaccharide domains of glycolipids of the neolacto series. J. Biol. Chem. 259, 6586–6592.

    CAS  PubMed  Google Scholar 

  9. Sojar H. T. and Bahl O. P. (1987) A chemical method for the deglycosylation of proteins. Arch. Biochem. Biophys. 259, 52–57.

    Article  CAS  PubMed  Google Scholar 

  10. Blum H., Beier H., and Gross H. J. (1987) Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels. Electrophoresis 8, 93–99.

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2002 Humana Press Inc.

About this protocol

Cite this protocol

Löster, K., Kannicht, C. (2002). 2D-Electrophoresis: Detection of Glycosylation and Influence on Spot Pattern . In: Kannicht, C. (eds) Posttranslational Modifications of Proteins. Methods in Molecular Biology™, vol 194. Humana Press. https://doi.org/10.1385/1-59259-181-7:301

Download citation

  • DOI: https://doi.org/10.1385/1-59259-181-7:301

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-678-9

  • Online ISBN: 978-1-59259-181-7

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics