Skip to main content

Thermostable Ligase-Mediated Incorporation of Mutagenic Oligonucleotides During PCR Amplification

  • Protocol
  • 7496 Accesses

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 67))

Abstract

PCR amplification has become an extremely powerful and universally used technique for cloning and manipulating DNA segments. It is especially useful for the ability to alter the terminal sequences of an amplified product simply by using primers containing the desired changes. However, the inability to alter easily regions of a product between the amplification primers has limited the use of PCR for more general mutagenesis. The protocol presented in this chapter employs a sample method that removes this limitation.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   74.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Michael, S. F. (1994) Mutagenesis by incorporation of a phosphorylated oligo during PCR amplification. Biotechniques 16, 410–412.

    CAS  PubMed  Google Scholar 

  2. Baraney, F. (1991) Genetic disease detection and DNA amplification using cloned thermostable ligase. Proc. Natl. Acad. Sci. USA 88, 189–193.

    Article  Google Scholar 

  3. Kunkel, T. A., Bebenek, K., and McClary, J. (1991) Efficient site-directed mutagenesis using uracil-containing DNA. Methods Enzymol. 204, 125–139.

    Article  CAS  PubMed  Google Scholar 

  4. Sarkar, G. and Sommer, S. S. (1990) The “megaprimer” method of site directed mutagenesis. Biotechniques 8, 404–407.

    CAS  PubMed  Google Scholar 

  5. Higuchi, R., Krummel, B., and Saiki, R. K. (1988) A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions. Nucleic Acids Res. 16, 7351–7367.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  6. Ho, S. N., Hunt, H. D., Horton, R. M., Pullen, J. K., and Pease, L. R. (1989) Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77, 51–59.

    Article  CAS  PubMed  Google Scholar 

  7. Gustin, K. E. and Burk, R. D. (1993) A rapid method for generating linker scanning mutants utilizing PCR. Biotechniques 14, 22,23.

    CAS  PubMed  Google Scholar 

  8. Rouwendal, G. J. A., Wolbert, E. J. H., Zwiers, L-H., and Springer, J. (1993) Simultaneous mutagenesis of multiple sites: application of the ligase chain reaction using PCR products instead of oligonucleotides. Biotechniques 15, 68–75.

    CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1997 Humana Press Inc.

About this protocol

Cite this protocol

Michael, S.F. (1997). Thermostable Ligase-Mediated Incorporation of Mutagenic Oligonucleotides During PCR Amplification. In: White, B.A. (eds) PCR Cloning Protocols. Methods in Molecular Biology™, vol 67. Humana Press, Totowa, NJ. https://doi.org/10.1385/0-89603-483-6:189

Download citation

  • DOI: https://doi.org/10.1385/0-89603-483-6:189

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-0-89603-483-9

  • Online ISBN: 978-1-59259-553-2

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics