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Rho Family and Rap GTPase Activation Assays

  • Richard T. Jennings
  • Ulla G. Knaus
Protocol
Part of the Methods in Molecular Biology book series (MIMB, volume 1124)

Abstract

The detection of Ras superfamily GTPase activity in innate immune cells is important when studying signaling events elicited by various ligands and cellular processes. The development of high-affinity probes detecting the activated, GTP-bound form of small GTPases has significantly enhanced our understanding of initiation and termination of GTPase-regulated signaling pathways. These probes are created by fusing a high-affinity GTPase-binding domain derived from a specific downstream effector protein to glutathione S-transferase (GST). Such domains bind preferentially to the GTP-bound form of the upstream Rho or Ras GTPase. Coupling these probes to beads enables extraction of the complex and subsequent quantification of the active GTP-binding protein by immunoblotting. Although effector domains that discriminate efficiently between GDP- and GTP-bound states and highly specific antibodies are not yet available for every small GTPase, analysis of certain members of the Rho and Ras GTPase family is now routinely performed. Here, we describe affinity-based pulldown assays for detection of Rho GTPase (Rac1/2, Cdc42, RhoA/B) and Rap1/2 activity in stimulated neutrophils or macrophages.

Keywords

Rho GTPases Rac Cdc42 Rap Affinity-based GTP activity probe PBD assay RBD assay Pulldown assay 

Notes

Acknowledgments

This work was supported by grants from Science Foundation Ireland and the Health Research Board.

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Copyright information

© Springer Science+Business Media, LLC 2014

Authors and Affiliations

  • Richard T. Jennings
    • 1
  • Ulla G. Knaus
    • 1
  1. 1.Conway InstituteUniversity College DublinDublinIreland

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