Advertisement

HIV-1 Accessory Proteins: VpR

Protocol
Part of the Methods in Molecular Biology book series (MIMB, volume 1087)

Abstract

HIV-1 viral protein R (VpR) is a multifunctional protein that plays specific roles at multiple stages of the HIV-1 viral life cycle and affects anti-HIV functions of the immune cells. VpR is required for efficient viral replication in nondividing cells such as macrophages, and it promotes, to some extent, viral replication in the proliferating target CD4+ T cells. A number of specific activities that may contribute to these effects of VpR have been proposed. In this chapter, we describe two best characterized activities of VpR, nuclear import of the HIV-1 preintegration complex (PIC) and induction of cell cycle G2 arrest, focusing on the methods used for their demonstration.

Key words

HIV-1 Vpr Cell cycle G2 arrest Nuclear transport Fission yeast 

Notes

Acknowledgments

This work was supported in part by the District of Columbia Developmental Center for AIDS Research (DC D-CFAR), NIH-funded program (1P30AI087714 – 01, MB), and NIH-NINDS-R21-NS063880 (RZ). The authors would like to thank Ge Li for technical assistance of this manuscript.

References

  1. 1.
    Heinzinger NK, Bukrinsky MI, Haggerty SA, Ragland AM, Kewalramani V, Lee MA, Gendelman HE, Ratner L, Stevenson M, Emerman M (1994) The Vpr protein of human immunodeficiency virus type 1 influences nuclear localization of viral nucleic acids in nondividing host cells. Proc Natl Acad Sci USA 91:7311–7315PubMedCentralCrossRefPubMedGoogle Scholar
  2. 2.
    de Noronha CM, Sherman MP, Lin HW, Cavrois MV, Moir RD, Goldman RD, Greene WC (2001) Dynamic disruptions in nuclear envelope architecture and integrity induced by HIV-1 Vpr. Science 294:1105–1108CrossRefPubMedGoogle Scholar
  3. 3.
    Popov S, Rexach M, Zybarth G, Reiling N, Lee MA, Ratner L, Lane CM, Moore MS, Blobel G, Bukrinsky M (1998) Viral protein R regulates nuclear import of the HIV-1 pre-integration complex. EMBO J 17:909–917PubMedCentralCrossRefPubMedGoogle Scholar
  4. 4.
    Connor RI, Chen BK, Choe S, Landau NR (1995) Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes. Virology 206:935–944CrossRefPubMedGoogle Scholar
  5. 5.
    Nakielny S, Shaikh S, Burke B, Dreyfuss G (1999) Nup153 is an M9-containing mobile nucleoporin with a novel Ran-binding domain. EMBO J 18:1982–1995PubMedCentralCrossRefPubMedGoogle Scholar
  6. 6.
    Wente SR (2000) Gatekeepers of the nucleus. Science 288:1374–1377CrossRefPubMedGoogle Scholar
  7. 7.
    Herold A, Truant R, Wiegand H, Cullen BR (1998) Determination of the functional domain organization of the importin alpha nuclear import factor. J Cell Biol 143:309–318PubMedCentralCrossRefPubMedGoogle Scholar
  8. 8.
    Kobe B (1999) Autoinhibition by an internal nuclear localization signal revealed by the crystal structure of mammalian importin alpha. Nat Struct Biol 6:388–397CrossRefPubMedGoogle Scholar
  9. 9.
    Gallay P, Stitt V, Mundy C, Oettinger M, Trono D (1996) Role of the karyopherin pathway in human immunodeficiency virus type 1 nuclear import. J Virol 70:1027–1032PubMedCentralPubMedGoogle Scholar
  10. 10.
    Jenkins Y, McEntee M, Weis K, Greene WC (1998) Characterization of HIV-1 vpr nuclear import: analysis of signals and pathways. J Cell Biol 143:875–885PubMedCentralCrossRefPubMedGoogle Scholar
  11. 11.
    Nitahara-Kasahara Y, Kamata M, Yamamoto T, Zhang X, Miyamoto Y, Muneta K, Iijima S, Yoneda Y, Tsunetsugu-Yokota Y, Aida Y (2007) Novel nuclear import of Vpr promoted by importin alpha is crucial for human immunodeficiency virus type 1 replication in macrophages. J Virol 81:5284–5293PubMedCentralCrossRefPubMedGoogle Scholar
  12. 12.
    He J, Choe S, Walker R, Di Marzio P, Morgan DO, Landau NR (1995) Human immunodeficiency virus type 1 viral protein R (Vpr) arrests cells in the G2 phase of the cell cycle by inhibiting p34cdc2 activity. J Virol 69: 6705–6711PubMedCentralPubMedGoogle Scholar
  13. 13.
    Jowett JB, Planelles V, Poon B, Shah NP, Chen ML, Chen IS (1995) The human immunodeficiency virus type 1 vpr gene arrests infected T cells in the G2 + M phase of the cell cycle. J Virol 69:6304–6313PubMedCentralPubMedGoogle Scholar
  14. 14.
    Re F, Braaten D, Franke EK, Luban J (1995) Human immunodeficiency virus type 1 Vpr arrests the cell cycle in G2 by inhibiting the activation of p34cdc2-cyclin B. J Virol 69: 6859–6864PubMedCentralPubMedGoogle Scholar
  15. 15.
    Poon B, Grovit-Ferbas K, Stewart SA, Chen ISY (1998) Cell cycle arrest by Vpr in HIV-1 virions and insensitivity to antiretroviral agents. Science 281:266–269CrossRefPubMedGoogle Scholar
  16. 16.
    Goh WC, Rogel ME, Kinsey CM, Michael SF, Fultz PN, Nowak MA, Hahn BH, Emerman M (1998) HIV-1 Vpr increases viral expression by manipulation of the cell cycle: a mechanism for selection of Vpr in vivo. Nat Med 4:65–71CrossRefPubMedGoogle Scholar
  17. 17.
    Iordanskiy S, Zhao Y, Dubrovsky L, Iordanskaya T, Chen M, Liang D, Bukrinsky M (2004) Heat shock protein 70 protects cells from cell cycle arrest and apoptosis induced by human immunodeficiency virus type 1 viral protein R. J Virol 78:9697–9704PubMedCentralCrossRefPubMedGoogle Scholar
  18. 18.
    Andersen JL, Le RE, Planelles V (2008) HIV-1 Vpr: mechanisms of G2 arrest and apoptosis. Exp Mol Pathol 85:2–10PubMedCentralCrossRefPubMedGoogle Scholar
  19. 19.
    Elder RT, Benko Z, Zhao Y (2002) HIV-1 VPR modulates cell cycle G2/M transition through an alternative cellular mechanism other than the classic mitotic checkpoints. Front Biosci 7:d349–d357CrossRefPubMedGoogle Scholar
  20. 20.
    Zhao RY, Bukrinsky M, Elder RT (2005) HIV-1 viral protein R (Vpr) & host cellular responses. Indian J Med Res 121:270–286PubMedGoogle Scholar
  21. 21.
    Tachiwana H, Shimura M, Nakai-Murakami C, Tokunaga K, Takizawa Y, Sata T, Kurumizaka H, Ishizaka Y (2006) HIV-1 Vpr induces DNA double-strand breaks. Cancer Res 66:627–631CrossRefPubMedGoogle Scholar
  22. 22.
    Elder RT, Yu M, Chen M, Edelson S, Zhao Y (2000) Cell cycle G2 arrest induced by HIV-1 Vpr in fission yeast (Schizosaccharomyces pombe) is independent of cell death and early genes in the DNA damage checkpoint. Virus Res 68:161–173CrossRefPubMedGoogle Scholar
  23. 23.
    Mansky LM (1996) The mutation rate of human immunodeficiency virus type 1 is influenced by the vpr gene. Virology 222: 391–400CrossRefPubMedGoogle Scholar
  24. 24.
    Lai M, Chen J (2006) The role of Vpr in HIV-1 disease progression is independent of its G2 arrest induction function. Cell Cycle 5:2275–2280CrossRefPubMedGoogle Scholar
  25. 25.
    Li G, Elder RT, Qin K, Park HU, Liang D, Zhao RY (2007) Phosphatase type 2A-dependent and -independent pathways for ATR phosphorylation of Chk1. J Biol Chem 282:7287–7298CrossRefPubMedGoogle Scholar
  26. 26.
    Li G, Park HU, Liang D, Zhao RY (2010) Cell cycle G2/M arrest through an S phase-dependent mechanism by HIV-1 viral protein R. Retrovirology 7:59PubMedCentralCrossRefPubMedGoogle Scholar
  27. 27.
    Roshal M, Kim B, Zhu Y, Nghiem P, Planelles V (2003) Activation of the ATR-mediated DNA damage response by the HIV-1 viral protein R. J Biol Chem 278:25879–25886CrossRefPubMedGoogle Scholar
  28. 28.
    Zimmerman ES, Chen J, Andersen JL, Ardon O, DeHart JL, Blackett J, Choudhary SK, Camerini D, Nghiem P, Planelles V (2004) Human immunodeficiency virus type 1 Vpr-mediated G2 arrest requires Rad17 and Hus1 and induces nuclear BRCA1 and gamma-H2AX focus formation. Mol Cell Biol 24: 9286–9294PubMedCentralCrossRefPubMedGoogle Scholar
  29. 29.
    Lai M, Zimmerman ES, Planelles V, Chen J (2005) Activation of the ATR pathway by human immunodeficiency virus type 1 Vpr involves its direct binding to chromatin in vivo. J Virol 79:15443–15451PubMedCentralCrossRefPubMedGoogle Scholar
  30. 30.
    Li G, Elder RT, Dubrovsky L, Liang D, Pushkarsky T, Chiu K, Fan T, Sire J, Bukrinsky M, Zhao RY (2010) HIV-1 replication through hHR23A-mediated interaction of Vpr with 26S proteasome. PLoS One 5:e11371PubMedCentralCrossRefPubMedGoogle Scholar
  31. 31.
    Masuda M, Nagai Y, Oshima N, Tanaka K, Murakami H, Igarashi H, Okayama H (2000) Genetic studies with the fission yeast Schizosaccharomyces pombe suggest involvement of wee1, pp a2, and rad24 in induction of cell cycle arrest by human immunodeficiency virus type 1 Vpr. J Virol 74:2636–2646PubMedCentralCrossRefPubMedGoogle Scholar
  32. 32.
    Zhao Y, Cao J, O'Gorman MR, Yu M, Yogev R (1996) Effect of human immunodeficiency virus type 1 protein R (vpr) gene expression on basic cellular function of fission yeast Schizosaccharomyces pombe. J Virol 70: 5821–5826PubMedCentralPubMedGoogle Scholar
  33. 33.
    Zhao Y, Elder RT (2000) Yeast perspectives on HIV-1 VPR. Front Biosci 5:D905–D916CrossRefPubMedGoogle Scholar
  34. 34.
    Cassany A, Gerace L (2009) Reconstitution of nuclear import in permeabilized cells. Methods Mol Biol 464:181–205PubMedCentralCrossRefPubMedGoogle Scholar
  35. 35.
    Fassati A, Goff SP (2001) Characterization of intracellular reverse transcription complexes of human immunodeficiency virus type 1. J Virol 75:3626–3635PubMedCentralCrossRefPubMedGoogle Scholar
  36. 36.
    Iordanskiy S, Berro R, Altieri M, Kashanchi F, Bukrinsky M (2006) Intracytoplasmic maturation of the human immunodeficiency virus type 1 reverse transcription complexes determines their capacity to integrate into chromatin. Retrovirology 3:4PubMedCentralCrossRefPubMedGoogle Scholar
  37. 37.
    Gallo CJ, Koza RA, Herbst EJ (1986) Polyamines and HeLa-cell DNA replication. Biochem J 238:37–42PubMedCentralCrossRefPubMedGoogle Scholar
  38. 38.
    Maundrell K (1990) nmt1 of fission yeast. A highly transcribed gene completely repressed by thiamine. J Biol Chem 265:10857–10864PubMedGoogle Scholar
  39. 39.
    Zhao Y, Yu M, Chen M, Elder RT, Yamamoto A, Cao J (1998) Pleiotropic effects of HIV-1 protein R (Vpr) on morphogenesis and cell survival in fission yeast and antagonism by pentoxifylline. Virology 246:266–276CrossRefPubMedGoogle Scholar
  40. 40.
    Lee M, Nurse P (1988) Cell cycle control genes in fission yeast and mammalian cells. Trends Genet 4:287–290CrossRefPubMedGoogle Scholar
  41. 41.
    Nurse P, Thuriaux P, Nasmyth K (1976) Genetic control of the cell division cycle in the fission yeast Schizosaccharomyces pombe. Mol Gen Genet 146:167–178CrossRefPubMedGoogle Scholar
  42. 42.
    Zhao Y, Lieberman HB (1995) Schizosaccharomyces pombe: a model for molecular studies of eukaryotic genes. DNA Cell Biol 14:359–371CrossRefPubMedGoogle Scholar
  43. 43.
    Alfa CE, Gallagher IM, Hyams JS (1993) Antigen localization in fission yeast. Methods Cell Biol 37:201–222CrossRefPubMedGoogle Scholar
  44. 44.
    Dean DA, Kasamatsu H (1994) Signal- and energy-dependent nuclear transport of SV40 Vp3 by isolated nuclei. Establishment of a filtration assay for nuclear protein import. J Biol Chem 269:4910–4916PubMedGoogle Scholar

Copyright information

© Springer Science+Business Media, LLC 2014

Authors and Affiliations

  1. 1.Department of Microbiology, Immunology, and Tropical Medicine, School of Medicine and Health SciencesThe George Washington UniversityWashington, DCUSA
  2. 2.School of Medicine and Health SciencesGeorge Washington UniversityWashington, DCUSA

Personalised recommendations