Protocol

Bacterial Molecular Networks

Volume 804 of the series Methods in Molecular Biology pp 481-499

Date:

Modelling the Evolution of Mutualistic Symbioses

  • Maren L. FriesenAffiliated withDepartment of Molecular and Computational Biology, University of Southern California Email author 
  • , Emily I. JonesAffiliated withSchool of Biological Sciences, Washington State University

* Final gross prices may vary according to local VAT.

Get Access

Abstract

Mutualistic microbial symbioses are one of the key innovations in the evolution of biological diversity, enabling the expansion of species’ niches and the production of sophisticated structures such as the eukaryotic cell. For some of the best-studied cases, we are beginning to have network models of symbiotic metabolism, but this work is in its infancy and has not been developed with an evolutionary perspective. However, theoreticians have long been interested in how these symbioses arise and persist and have applied modelling approaches from economics, evolution, ecology, and sociobology to a number of fundamental questions. We provide an overview of these questions, followed by specific modelling examples. We cover economic game theory, including the Prisoner’s Dilemma, the Snowdrift game, and biological markets. We also describe the eco-evolutionary framework of adaptive dynamics, inclusive fitness, and population genetic models. We aim to provide insight into the strengths and weaknesses of each approach and into how current evolutionary methods can benefit an understanding of the mechanistic basis of host–symbiont interactions elucidated by molecular network models.

Key words

Symbiosis Mutualism Game theory Adaptive dynamics Inclusive fitness Biological markets Population genetics Cooperative bargaining