Skip to main content

Refolding Your Protein with a Little Help from REFOLD

Part of the Methods in Molecular Biology book series (MIMB,volume 752)

Abstract

The expression and harvesting of proteins from insoluble inclusion bodies by solubilization and refolding is a technique commonly used in the production of recombinant proteins. Despite the importance of refolding, publications in the literature are essentially ad hoc reports consisting of a dazzling array of experimental protocols and a diverse collection of buffer cocktails. For the protein scientists, using this information to refold their protein of interest presents enormous challenges. Here, we describe some of the practical considerations in refolding and present several standard protocols. Further, we describe how refolding procedures can be designed and modified using the information in the REFOLD database (http://refold.med.monash.edu.au), a freely available, open repository for protocols describing the refolding and purification of recombinant proteins.

Key words

  • Protein expression
  • Refolding
  • Renaturation
  • Inclusion body
  • Aggregate
  • Refold
  • Misfolding
  • Solubilization

This is a preview of subscription content, access via your institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • DOI: 10.1007/978-1-60327-223-0_4
  • Chapter length: 13 pages
  • Instant PDF download
  • Readable on all devices
  • Own it forever
  • Exclusive offer for individuals only
  • Tax calculation will be finalised during checkout
eBook
USD   84.99
Price excludes VAT (USA)
  • ISBN: 978-1-60327-223-0
  • Instant PDF download
  • Readable on all devices
  • Own it forever
  • Exclusive offer for individuals only
  • Tax calculation will be finalised during checkout
Softcover Book
USD   109.99
Price excludes VAT (USA)
Hardcover Book
USD   159.99
Price excludes VAT (USA)
Fig. 1.
Fig. 2.

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Sorensen, H. P., and Mortensen, K. K. (2005) Soluble expression of recombinant proteins in the cytoplasm of Escherichia coli Microb. Cell Fact. 4, 1.

    CrossRef  Google Scholar 

  2. Sorensen, H. P., and Mortensen, K. K. (2005) Advanced genetic strategies for recombinant protein expression in Escherichia coli J. Biotechnol. 115, 113–28.

    CrossRef  CAS  Google Scholar 

  3. De Marco, V., Stier, G., Blandin, S., and de Marco, A. (2004) The solubility and stability of recombinant proteins are increased by their fusion to NusA Biochem. Biophys. Res. Commun. 322, 766–71.

    CrossRef  Google Scholar 

  4. Dyson, M. R., Shadbolt, S. P., Vincent, K. J., Perera, R. L., and McCafferty, J. (2004) Production of soluble mammalian proteins in Escherichia coli: identification of protein features that correlate with successful expression BMC Biotechnol. 4, 32.

    Google Scholar 

  5. Kapust, R. B., and Waugh, D. S. (1999) Escherichia coli maltose-binding protein is uncommonly effective at promoting the solubility of polypeptides to which it is fused Protein Sci. 8, 1668–74.

    CAS  Google Scholar 

  6. Cabrita, L. D., and Bottomley, S. P. (2004) Protein expression and refolding - A practical guide to getting the most out of inclusion bodies Biotechnol. Annu. Rev. 10, 31–50.

    CrossRef  CAS  Google Scholar 

  7. Fahnert, B., Lilie, H., and Neubauer, P. (2004) Inclusion bodies: formation and utilisation Adv. Biochem. Eng. Biotechnol. 89, 93–142.

    CAS  Google Scholar 

  8. Middelberg, A. P. (2002) Preparative protein refolding Trends Biotechnol. 20, 437–43.

    CrossRef  CAS  Google Scholar 

  9. Panda, A. K. (2003) Bioprocessing of therapeutic proteins from the inclusion bodies of Escherichia coli Adv. Biochem. Eng. Biotechnol. 85, 43–93.

    CAS  Google Scholar 

  10. Tsumoto, K., Ejima, D., Kumagai, I., and Arakawa, T. (2003) Practical considerations in refolding proteins from inclusion bodies Protein Expr Purif 28, 1–8.

    CrossRef  CAS  Google Scholar 

  11. Clark, E. D. B. (1998) Refolding of recombinant proteins Curr. Opin. Biotechnol. 9, 157–63.

    CrossRef  Google Scholar 

  12. Buckle, A. M., Devlin, G. L., Jodun, R. A., Fulton, K. F., Faux, N., Whisstock, J. C., and Bottomley, S. P. (2005) The matrix refolded Nat Methods 2, 3.

    CrossRef  CAS  Google Scholar 

  13. Chow, M. K., Amin, A. A., Fulton, K. F., Fernando, T., Kamau, L., Batty, C., Louca, M., Ho, S., Whisstock, J. C., Bottomley, S. P., and Buckle, A. M. (2006) The REFOLD database: a tool for the optimization of protein expression and refolding Nucleic Acids Res 34, D207–12.

    CAS  Google Scholar 

  14. Chow, M. K., Amin, A. A., Fulton, K. F., Whisstock, J. C., Buckle, A. M., and Bottomley, S. P. (2006) REFOLD: an analytical database of protein refolding methods Protein Expr Purif 46, 166–71.

    CrossRef  CAS  Google Scholar 

  15. Apweiler, R., Bairoch, A., Wu, C. H., Barker, W. C., Boeckmann, B., Ferro, S., Gasteiger, E., Huang, H., Lopez, R., Magrane, M., Martin, M. J., Natale, D. A., O’Donovan, C., Redaschi, N., and Yeh, L. S. (2004) UniProt: the Universal Protein knowledgebase Nucleic Acids Res. 32, D115–9.

    CrossRef  CAS  Google Scholar 

  16. Murzin, A. G., Brenner, S. E., Hubbard, T., and Chothia, C. (1995) SCOP: a structural classification of proteins database for the investigation of sequences and structures J. Mol. Biol. 247, 536–40.

    CAS  Google Scholar 

  17. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25, 3389–402.

    CAS  Google Scholar 

  18. Tsumoto, K., Umetsu, M., Kumagai, I., Ejima, D., Philo, J. S., and Arakawa, T. (2004) Role of arginine in protein refolding, solubilization, and purification Biotechnol Prog 20, 1301–8.

    CrossRef  PubMed  CAS  Google Scholar 

  19. Altamirano, M. M., Golbik, R., Zahn, R., Buckle, A. M., and Fersht, A. R. (1997) Refolding chromatography with immobilized mini-chaperones Proc Natl Acad Sci U S A 94, 3576–8.

    CrossRef  CAS  Google Scholar 

Download references

Acknowledgments

The authors would like to acknowledge the contribution of all the researchers whose published data has been entered into REFOLD. This work was supported by grants from the National Health and Medical Research Council, the Victorian State Government, and the Victorian Partnership for Advanced Computing. SPB is a Monash University Senior Logan Fellow and NHMRC Senior Research Fellow. AMB is an NHMRC Senior Research Fellow.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ashley M. Buckle .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and Permissions

Copyright information

© 2011 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Phan, J., Yamout, N., Schmidberger, J., Bottomley, S.P., Buckle, A.M. (2011). Refolding Your Protein with a Little Help from REFOLD. In: Hill, A., Barnham, K., Bottomley, S., Cappai, R. (eds) Protein Folding, Misfolding, and Disease. Methods in Molecular Biology, vol 752. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-60327-223-0_4

Download citation

  • DOI: https://doi.org/10.1007/978-1-60327-223-0_4

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-60327-221-6

  • Online ISBN: 978-1-60327-223-0

  • eBook Packages: Springer Protocols