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Molecular Profiling pp 119–138Cite as

An Overview of MicroRNA Methods: Expression Profiling and Target Identification

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Part of the book series: Methods in Molecular Biology ((MIMB,volume 823))

Abstract

MicroRNAs (miRNAs) are small, single-stranded RNA molecules encoded by genes that are transcribed from DNA but not translated into protein (noncoding RNA). The ability of miRNA to regulate the expression of, as yet, an unknown quantity of targets has recently become an area of huge interest to researchers studying many different areas in many species. Identifying miRNA targets provides functional insights and strategies for therapy. Furthermore, the recent advent of high-throughput methods for profiling miRNA expression and for the identification of miRNA targets has ushered in a new era in the research of gene regulation. miRNA profiling further adds a new dimension of information for the molecular profiling of disease. Summarized herein are the methods used to query the expression of miRNAs at both an individual and global level. We have also described modern computational approaches to identifying miRNA target transcripts.

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Authors and Affiliations

  1. Institute of Molecular Medicine, Trinity College Dublin, Dublin, Ireland

    Sinéad M. Smith

  2. Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin, Ireland

    David W. Murray

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  1. Sinéad M. Smith
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Correspondence to David W. Murray .

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Editors and Affiliations

  1. Center for Applied Proteomics and, George Mason University, University Blvd. 10900, Manassas, 20110, Virginia, USA

    Virginia Espina

  2. Center for Applied Proteomics &, George Mason University, University Blvd. 10900, Manassas, 20110, Virginia, USA

    Lance A. Liotta

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Smith, S.M., Murray, D.W. (2012). An Overview of MicroRNA Methods: Expression Profiling and Target Identification. In: Espina, V., Liotta, L. (eds) Molecular Profiling. Methods in Molecular Biology, vol 823. Humana Press. https://doi.org/10.1007/978-1-60327-216-2_9

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  • DOI: https://doi.org/10.1007/978-1-60327-216-2_9

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