Sample Preparation of Bronchoalveolar Lavage Fluid
- 10 Citations
- 2.4k Downloads
Summary
Respiratory diseases are important health problem throughout the world. The bronchoalveolar lavage (BAL) fluid obtained by fiber-optic bronchoscopy is a biofluid reflecting the expression of secreted pulmonary proteins and the products of activated cells. The characterization of the BALF proteome provides an opportunity to establish diagnostic and get prognostic indicators of airway diseases. The main part of the chapter is devoted to the description of the most effective and reliable method of BALF sample preparation and processing for proteomic studies. Principal BALF proteome characteristics and the difficulties to work with this fluid are also introduced. Finally, the best conditions for high resolution and high reliability 2-dimensional electrophoresis (DE) of BALF samples are given.
Key Words
BALF sampling bronchoalveolar lavage fluid epithelial lining fluid lung mass spectrometry proteomeNotes
Acknowledgments
R. Wattiez is Research Associate of the Belgian FNRS. The authors thanks Catherine S’Heeren for her technical assitance.
References
- 1.Wattiez, R. and Falmagne, P. (2005) Proteomics of bronchoalveolar lavage fluid. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 815, 169–78.CrossRefPubMedGoogle Scholar
- 2.Baughman, R. P. and Drent, M. (2001) Role of bronchoalveolar lavage in interstitial lung disease. Clin. in Chest Med. 22, 331–41.CrossRefGoogle Scholar
- 3.Reynolds, H.Y. (2000) Use of bronchoalveolar lavage in humans—past necessity and future imperative. Lung 25, 271–93.CrossRefGoogle Scholar
- 4.Wattiez, R., Hermans, C., Bernard, A., Lesur, O., and Falmagne, P. (1999) Human bronchoalveolar lavage fluid: two-dimensional gel electrophoresis, amino acid microsequencing and identification of major proteins. Electrophoresis 20, 1634–45.CrossRefPubMedGoogle Scholar
- 5.Noel-Georis, I., Bernard, A., Falmagne, P., and Wattiez, R. (2002) Database of bronchoalveolar lavage fluid proteins. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 771, 221–36.CrossRefPubMedGoogle Scholar
- 6.Magi, B., Bini, L., Perari, M.G., Fossi, A., Sanchez, J.C., Hochstrasser, D., Paesano, S., Raggiaschi, R., Santucci, A., Pallini, V., and Rottoli, P. (2002) Bronchoalveolar lavage fluid protein composition in patients with sarcoidosis and idiopathic pulmonary fibrosis: a two-dimensional electrophoretic study. Electrophoresis 23, 3434–44.CrossRefPubMedGoogle Scholar
- 7.Lindahl, M., Stahlbom, B., and Tagesson, C. (1999) Newly identified proteins in human nasal and bronchoalveolar lavage fluids: potential biomedical and clinical applications. Electrophoresis 20, 3670–6.CrossRefPubMedGoogle Scholar
- 8.Sabounchi-Schutt, F., Astrom, J., Hellman, U., Eklund, A., and Grunewald, J. (2003) Changes in bronchoalveolar lavage fluid proteins in sarcoidosis: a proteomics approach. Eur. Respir. J. 21, 414–20.CrossRefPubMedGoogle Scholar
- 9.Noel-Georis, I., Bernard, A., Falmagne, P. and Wattiez, R. (2001) Proteomics as the tool to search for lung disease markers in bronchoalveolar lavage. Dis. Markers 17, 271–8.PubMedGoogle Scholar
- 10.Kriegova, E., Melle, C., Kolek, V., Hutyrova, B., Mrazek, F., Bleul, A., du Bois, R. M., von Eggeling, F. and Petrek, M. (2006) Protein Profiles of Bronchoalveolar Lavage Fluid from Patients with Pulmonary Sarcoidosis. Am. J. Resp. Crit. Care Med. 26, 1145–54.CrossRefGoogle Scholar
- 11.Lenz, A. G., Meyer, B., Costabel, U., and Maier, K. (1993) Bronchoalveolar lavage fluid proteins in human lung disease: analysis by two-dimensional electrophoresis. Electrophoresis 14, 242–4.CrossRefPubMedGoogle Scholar
- 12.Lenz, A. G., Meyer, B., Weber, H., and Maier, K. (1990) Two-dimensional electrophoresis of dog bronchoalveolar lavage fluid proteins. Electrophoresis 11, 510–3.CrossRefPubMedGoogle Scholar
- 13.Plymoth, A., Lofdahl, C. G., Ekberg-Jansson, A., Dahlback, M., Lindberg, H., Fehniger, T. E., and Marko-Varga, G. (2003) Human bronchoalveolar lavage: biofluid analysis with special emphasis on sample preparation. Proteomics 3, 962–72.CrossRefPubMedGoogle Scholar
- 14.Wu, J., Kobayashi, M., Sousa, E., Lieu, W., Cai, J., Goldman, S.J., Dorner, A. J., Projan, S. J., Kavuru, M. S., Qiu, Y., and Thomassen, M. J. (2005) Differential proteomic analysis of bronchoalveolar lavage fluid in asthmatics following segmental antigen challenge. Mol. Cell. Proteomics 4, 1251–64.CrossRefPubMedGoogle Scholar
- 15.Chromy, B., Gonzales, A., Perkins, J., Choi, M., Corzett, M., Chang, B. C., Corzett, C. H., and McCutchen-Maloney, S. L. (2004) Proteomic analysis of human serum by two-dimensional differential gel electrophoresis after depletion of high-abundant proteins. J. Proteome Res. 6, 4–8.Google Scholar