Abstract
There is limited information regarding the biobanking of pleural and peritoneal fluids that might supplement storage of pulmonary and thoracic tissue biospecimens. Such fluids are sometimes collected for clinical analyses and may have uses that obviate or supplement tissue samples. There has been a growing interest in using liquid biopsies as they are less invasive and may be amenable to analyses that guide targeted therapies. Integrating cytology and biobanking approaches, we describe techniques that may be used for collecting and banking pleural and peritoneal fluids.
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References
Rothwell E, Maschke KJ, Botkin JR et al (2015) Biobanking research and human subjects protections: perspectives of IRB leaders. IRB 37:8–13
McIntosh LD, Sharma MK, Mulvihill D et al (2015) caTissue Suite to OpenSpecimen: developing an extensible, open source, web-based biobanking management system. J Biomed Inform 57:456–464
Mullins P, Pugh R, Vaught J (2015) Following up on ISBER (2015): call for environmental biobanking papers. Biopreserv Biobank 13:229–230
Rush A, Battisti R, Barton B, Catchpoole D (2015) Opinions of young adults on re-consenting for biobanking. J Pediatr 167(4):925–930
Wheelock AM, Paulson L, Litton JE, EuPA Biobank Initiative Group (2015) The EuPA Biobank Initiative: meeting the future challenges of biobanking in proteomics & systems medicine. J Proteome 127(Pt B):414–416
Tupasela A, Snell K, Canada JA (2015) Constructing populations in biobanking. Life Sci Soc Policy 11:5
Milley KM, Nimmo JS, Bacci B, Ryan SD, Richardson SJ, Danks JA, DogMATIC (2015) A remote biospecimen collection kit for biobanking. Biopreserv Biobank 13:247–254
Joly Y, Dalpe G, So D, Birko S (2015) Fair shares and sharing fairly: a survey of public views on open science, informed consent and participatory research in biobanking. PLoS One 10:e0129893
Bowton EA, Collier SP, Wang X et al (2015) Phenotype-driven plasma biobanking strategies and methods. J Pers Med 5:140–152
Hallinan D, Friedewald M (2015) Open consent, biobanking and data protection law: can open consent be ‘informed’ under the forthcoming data protection regulation? Life Sci Soc Policy 11:1
Pekar G, Davies H, Lukacs AP et al (2016) Biobanking multifocal breast carcinomas: sample adequacy with regard to histology and DNA content. Histopathology 68(3):411–421
Locock L, Boylan AM (2015) Biosamples as gifts? How participants in biobanking projects talk about donation. Health Expect 19(4):805–816
Leusmann P, Veeck J, Jakel J et al (2015) Towards sustainable data management in professional biobanking. Stud Health Technol Inform 212:94–102
Hofer P, Neururer S, Hauffe H, Insam T, Zeilner A, Gobel G (2015) Semi-automated evaluation of biomedical ontologies for the biobanking domain based on competency questions. Stud Health Technol Inform 212:65–72
Castillo-Pelayo T, Babinszky S, LeBlanc J, Watson PH (2015) The importance of biobanking in cancer research. Biopreserv Biobank 13:172–177
Amin W, Parwani AV, Melamed J et al (2013) National mesothelioma virtual bank: a platform for collaborative research and mesothelioma biobanking resource to support translational research. Lung Cancer Int 2013:765748
National Mesothelioma Virtual Bank. https://mesotissue.org/. Accessed Nov 2015
Krishnamurthy S (2015) Biospecimen repositories and cytopathology. Cancer Cytopathol 123:152–161
Perskvist N, Norman I, Eklund C, Litton JE, Dillner J (2013) The Swedish cervical cytology biobank: sample handling and storage process. Biopreserv Biobank 11:19–24
Arbyn M, Andersson K, Bergeron C et al (2011) Cervical cytology biobanks as a resource for molecular epidemiology. Methods Mol Biol 675:279–298
Arbyn M, Van Veen EB, Andersson K et al (2010) Cervical cytology biobanking in Europe. Int J Biol Markers 25:117–125
Boulet GA, Horvath CA, Berghmans S et al (2008) Cervical cytology biobanking: quality of DNA from archival cervical Pap-stained smears. J Clin Pathol 61:637–641
Ugolini D, Neri M, Bennati L et al (2012) CREST biorepository for translational studies on malignant mesothelioma, lung cancer and other respiratory tract diseases: Informatics infrastructure and standardized annotation. Exp Ther Med 3:540–546
Ugolini D, Neri M, Canessa PA et al (2008) The CREST biorepository: a tool for molecular epidemiology and translational studies on malignant mesothelioma, lung cancer, and other respiratory tract diseases. Cancer Epidemiol Biomark Prev 17:3013–3019
Tumor Bank Caen University Hospital. https://www.chu-caen.fr/page.php?famille=8&idpage=126. Accessed Nov 2015
National Cancer Institute: Best Practices for Biospecimens Resources (2016) https://biospecimens.cancer.gov/bestpractices/2016-NCIBestPractices.pdf
Perskvist N, Bjorklund C, Dillner J (2014) A complex intervention for workflow enhancement at the Swedish cervical cytology biobank. Biopreserv Biobank 12:69–73
Hubel A, Spindler R, Skubitz AP (2014) Storage of human biospecimens: selection of the optimal storage temperature. Biopreserv Biobank 12:165–175
McCullough J, Haley R, Clay M et al (2010) Long-term storage of peripheral blood stem cells frozen and stored with a conventional liquid nitrogen technique compared with cells frozen and stored in a mechanical freezer. Transfusion 50:808–819
Hubel K, Rodger E, Gaviria JM et al (2005) Effective storage of granulocytes collected by centrifugation leukapheresis from donors stimulated with granulocyte-colony-stimulating factor. Transfusion 45:1876–1889
Hubel A, Carlquist D, Clay M, McCullough J (2004) Liquid storage, shipment, and cryopreservation of cord blood. Transfusion 44:518–525
Hubel A, Carlquist D, Clay M, McCullough J (2003) Cryopreservation of cord blood after liquid storage. Cytotherapy 5:370–376
Hubel A, Carlquist D, Clay M, McCullough J (2003) Short-term liquid storage of umbilical cord blood. Transfusion 43:626–632
Mora M, Angelini C, Bignami F et al (2015) The EuroBioBank Network: 10 years of hands-on experience of collaborative, transnational biobanking for rare diseases. Eur J Hum Genet 23:1116–1123
Castle PE, Solomon D, Hildesheim A et al (2003) Stability of archived liqui-based cervical cytologic specimens. Cancer Cytopathol 99:89–96
Galli J, Oelrich J, Taussig MJ et al (2015) The Biobanking Analysis Resource Catalogue (BARCdb): a new research tool for the analysis of biobank samples. Nucleic Acids Res 43:D1158–D1162
Klingstrom T (2013) Biobanking in emerging countries. Biopreserv Biobank 11:329–330
Killian JK, Walker RI, Suuriniemi M et al (2010) Archival fine-needle aspiration cytopathology (FNAC) samples: untapped resource for clinical molecular profiling. J Mol Diagn 12:739–745
Ladd DC, O’Sullivan-Mejia E, Lea T et al (2011) Preservation of fine needle aspiration specimens for future use in RNA-based molecular testing. Cancer Cytopathol 119:102–110
Murphy PG, Henderson DT, Adams MD et al (2009) Isolation of RNA from cell lines and cervical cytology specimens stored in BD Sure Path preservative fluid and downstream detection of housekeeping gene and HPV E6 expression using real time RT-pCR. J Virol Methods 156:138–144
Tarkowski TA, Rajeevan MS, Lee DR et al (2001) Improved detection of viral RNA isolated from liquid-based cytology samples. Mol Diagn 6:125–130
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Marchevsky, A.M., Bose, S., Knudsen, B. (2019). Procurement and Storage of Pleural and Peritoneal Fluids for Biobanking. In: Yong, W. (eds) Biobanking. Methods in Molecular Biology, vol 1897. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8935-5_13
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DOI: https://doi.org/10.1007/978-1-4939-8935-5_13
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