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Rare Variant Quantitation Using Droplet Digital PCR

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Part of the book series: Methods in Molecular Biology ((MIMB,volume 1881))

Abstract

Droplet digital PCR (ddPCR) allows precise quantitation of individual copies of DNA. Using allele-specific fluorescent oligonucleotide probes, ddPCR can enumerate both mutant and wild-type alleles enabling highly sensitive detection and quantitation of the variant allele frequency of mutated genes. In this protocol, we describe a method for using ddPCR to detect mutations in genomic DNA with a sensitivity of up to 1 in 50,000 DNA copies.

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Correspondence to Brian Parkin .

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Parkin, B. (2019). Rare Variant Quantitation Using Droplet Digital PCR. In: Malek, S. (eds) Chronic Lymphocytic Leukemia. Methods in Molecular Biology, vol 1881. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-8876-1_18

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  • DOI: https://doi.org/10.1007/978-1-4939-8876-1_18

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-8875-4

  • Online ISBN: 978-1-4939-8876-1

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