Autophagy pp 331-340 | Cite as

Monitoring of Autophagy and Cell Volume Regulation in Kidney Epithelial Cells in Response to Fluid Shear Stress

  • Maria M. Lazari
  • Idil Orhon
  • Patrice CodognoEmail author
  • Nicolas DupontEmail author
Part of the Methods in Molecular Biology book series (MIMB, volume 1880)


Fluidic shear stress applied to epithelial cells inside the kidney tubules affects cell size in an autophagy-related manner. Here, we describe the technical equipment that we routinely use to apply shear stress on cells, as well as immunoblotting, immunofluorescence, and three-dimensional cell volume reconstruction techniques used in analysis of the influence of this stress on cells and cellular components. By pointing out details of experimental techniques and potential pitfalls, this review will serve as a guide for those interested in study of how shear stress influences cells.

Key words

Autophagy Primary cilia Shear stress Fluid flow Microslides Cell volume Immunoblot Immunofluorescence Microscopy 



Work in the Codogno laboratory is supported by funding from INSERM, CNRS, and Université Paris-Descartes-Sorbonne Paris Cité and by grants from INCa and ANR. M.L. and I.O. are supported by an ERASMUS internship and a FEBS postdoctoral fellowship, respectively.


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Copyright information

© Springer Science+Business Media, LLC, part of Springer Nature 2019

Authors and Affiliations

  1. 1.Institut Necker-Enfants Malades (INEM), INSERM U1151-CNRS UMR 8253, Université Paris Descartes-Sorbonne Paris CitéParisFrance
  2. 2.Department of Cell Biology, University of Groningen, University Medical Center GroningenGroningenThe Netherlands

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