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Establishment of 3D Intestinal Organoid Cultures from Intestinal Stem Cells

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3D Cell Culture

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1612))

Abstract

The intestinal epithelium is the most rapidly renewed tissue in adult mammals, and its renewal is strictly controlled by intestinal stem cells. Extensive studies using genetic models of intestinal epithelium have revealed the mechanisms underlying the self-renewal of intestinal stem cells. Exploiting this knowledge, we developed a novel 3D culture system that enables the outgrowth of intestinal Lgr5+ stem cells derived from mouse and human tissues into ever-expanding crypt–villus mini-guts, known as intestinal epithelial organoids. These organoids are maintained by the self-renewal of stem cells and give rise to all differentiated cell types of the intestinal epithelium. Once established, organoids can be cryopreserved and thawed when needed. This culture system has been widely used for studying stem cell behavior and gene function and for disease modeling.

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References

  1. Barker N, van Es JH, Kuipers J et al (2007) Identification of stem cells in small intestine and colon by marker gene Lgr5. Nature 449:1003–1007

    Article  CAS  PubMed  Google Scholar 

  2. Sato T, Vries RG, Snippert HJ et al (2009) Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche. Nature 459:262–265

    Article  CAS  PubMed  Google Scholar 

  3. Sato T, Stange DE, Ferrante M et al (2011) Long-term expansion of epithelial organoids from human colon, adenoma, adenocarcinoma, and Barrett’s epithelium. Gastroenterology 141:1762–1772

    Article  CAS  PubMed  Google Scholar 

  4. Watanabe K, Ueno M, Kamiya D et al (2007) A ROCK inhibitor permits survival of dissociated human embryonic stem cells. Nat Biotechnol 25:681–686

    Article  CAS  PubMed  Google Scholar 

  5. Sato T, Clevers H (2013) Growing self-organizing mini-guts from a single intestinal stem cell: mechanism and applications. Science 340:1190–1194

    Article  CAS  PubMed  Google Scholar 

  6. Ootani A, Li X, Sangiorgi E et al (2009) Sustained in vitro intestinal epithelial culture within a Wnt-dependent stem cell niche. Nat Med 15:701–706

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Farin HF, Van Es JH, Clevers H (2012) Redundant sources of Wnt regulate intestinal stem cells and promote formation of Paneth cells. Gastroenterology 143:1518–1529

    Article  CAS  PubMed  Google Scholar 

  8. Willert K, Brown JD, Danenberg E et al (2003) Wnt proteins are lipid-modified and can act as stem cell growth factors. Nature 423:448–452

    Article  CAS  PubMed  Google Scholar 

  9. Korinek V, Barker N, Morin PJ et al (1997) Constitutive transcriptional activation by a beta-catenin-Tcf complex in APC−/− colon carcinoma. Science 275:1784–1787

    Article  CAS  PubMed  Google Scholar 

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Acknowledgments

We thank the past and present members of the Sato laboratory for their continued support. S.S. was supported by the Japan Society for the Promotion of Science Research Fellowships for Young Scientists. This work was supported in part by JSPS KAKENHI Grant Number 15J00981.

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Correspondence to Toshiro Sato M.D., Ph.D. .

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Sugimoto, S., Sato, T. (2017). Establishment of 3D Intestinal Organoid Cultures from Intestinal Stem Cells. In: Koledova, Z. (eds) 3D Cell Culture. Methods in Molecular Biology, vol 1612. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7021-6_7

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  • DOI: https://doi.org/10.1007/978-1-4939-7021-6_7

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7019-3

  • Online ISBN: 978-1-4939-7021-6

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