Skip to main content

In Vitro Assay to Extract Specific Lipid Types from Phospholipid Membranes Using Lipid-Transfer Proteins: A Lesson from the Ceramide Transport Protein CERT

  • Protocol
  • First Online:
Lipidomics

Part of the book series: Neuromethods ((NM,volume 125))

Abstract

Several mechanisms deliver specific lipid types from one organelle to another in cells. Two distinct mechanisms exist for inter-organelle lipid trafficking in eukaryotic cells: vesicular and non-vesicular. Lipid-transfer proteins (LTPs) that catalyze the inter-membrane transfer of lipids play pivotal roles in non-vesicular systems. As a key biochemical feature, LTPs extract a specific lipid type from membranes in vitro. This chapter describes two assay systems to assess the lipid extraction activity of the ceramide transport protein CERT from membranes under cell-free conditions: one is a conventional assay system using radioactive lipid ligands, while the other is a more recently developed assay system using surface plasmon resonance. These methods are applicable to other LTPs.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 119.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 159.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 159.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Hanada K, Voelker D (2014) Interorganelle trafficking of lipids: preface for the thematic review series. Traffic 15:889–894

    Article  CAS  PubMed  Google Scholar 

  2. Holthuis JC, Menon AK (2014) Lipid landscapes and pipelines in membrane homeostasis. Nature 510:48–57

    Article  CAS  PubMed  Google Scholar 

  3. Fukasawa M, Nishijima M, Hanada K (1999) Genetic evidence for ATP-dependent endoplasmic reticulum-to-Golgi apparatus trafficking of ceramide for sphingomyelin synthesis in Chinese hamster ovary cells. J Cell Biol 144:673–685

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Mesmin B, Bigay J, Moser von Filseck J, Lacas-Gervais S, Drin G, Antonny B (2013) A four-step cycle driven by PI(4)P hydrolysis directs sterol/PI(4)P exchange by the ER-Golgi tether OSBP. Cell 155:830–843

    Article  CAS  PubMed  Google Scholar 

  5. Chandler D (2005) Interfaces and the driving force of hydrophobic assembly. Nature 437:640–647

    Article  CAS  PubMed  Google Scholar 

  6. Ben-Amotz D, Underwood R (2008) Unraveling water's entropic mysteries: a unified view of nonpolar, polar, and ionic hydration. Acc Chem Res 41:957–967

    Article  CAS  PubMed  Google Scholar 

  7. Bankaitis VA, Mousley CJ, Schaaf G (2010) The Sec14 superfamily and mechanisms for crosstalk between lipid metabolism and lipid signaling. Trends Biochem Sci 35:150–160

    Article  CAS  PubMed  Google Scholar 

  8. Schulze H, Sandhoff K (2014) Sphingolipids and lysosomal pathologies. Biochim Biophys Acta 1841:799–810

    Article  CAS  PubMed  Google Scholar 

  9. Hanada K, Kumagai K, Yasuda S, Miura Y, Kawano M, Fukasawa M, Nishijima M (2003) Molecular machinery for non-vesicular trafficking of ceramide. Nature 426:803–809

    Article  CAS  PubMed  Google Scholar 

  10. Sugiki T, Takahashi H, Nagasu M, Hanada K, Shimada I (2010) Real-time assay method of lipid extraction activity. Anal Biochem 399:162–167

    Article  CAS  PubMed  Google Scholar 

  11. Bligh EG, Dyer WJ (1959) A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37:911–917

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

We deeply thank our coworkers for their invaluable contributions to studies concerning CERT. This work was supported by Takeda Science Foundation, and AMED-CREST (to K.H.), and the Ministry of Economy, Trade, and Industry (METI) and the New Energy and Industrial Technology Development Organization (NEDO) of Japan (to S.T.).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Kentaro Hanada .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer Science+Business Media LLC

About this protocol

Cite this protocol

Hanada, K., Sugiki, T. (2017). In Vitro Assay to Extract Specific Lipid Types from Phospholipid Membranes Using Lipid-Transfer Proteins: A Lesson from the Ceramide Transport Protein CERT. In: Wood, P. (eds) Lipidomics. Neuromethods, vol 125. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6946-3_6

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-6946-3_6

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6944-9

  • Online ISBN: 978-1-4939-6946-3

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics