Skip to main content

Detection of SUMOylation in Plasmodium falciparum

  • Protocol
  • First Online:
SUMO

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1475))

Abstract

Reversible protein modification by small ubiquitin-related modifiers (SUMOs) regulates many cellular processes, including transcription, protein quality control, cell division, and oxidative stress. SUMOylation is therefore essential for normal cell function and represents a potentially valuable target for the development of inhibitors of pathogenic eukaryotic organisms, including the malaria parasite, Plasmodium falciparum (Pf). The specific and essential functions of SUMOylation in Pf, however, remain largely uncharacterized. The further development of antimalarial drugs targeting SUMOylation would benefit significantly from a more detailed understanding of its functions and regulation during the parasite life cycle. The recent development of antibodies specific for Pf SUMO provides a valuable tool to study the functions and regulation of SUMOylation. In preliminary studies, we have used immunoblot analysis to demonstrate that SUMOylation levels vary significantly in parasites during different stages of the red blood cell cycle and also in response to oxidative stress. Owing to the dynamic nature of SUMOylation and to the robust activity of SUMO isopeptidases, analysis of SUMOylation in cultured Pf parasites requires a number of precautions during parasite purification and lysis. Here, we outline methods for preserving SUMO conjugates during isolation of Pf parasites from human red blood cell cultures, and for their detection by immunoblot analysis using PfSUMO-specific antibodies.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 109.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 139.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Otto TD, Wilinski D, Assefa S, Keane TM, Sarry LR, Bohme U, Lemieux J, Barrell B, Pain A, Berriman M et al (2010) New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq. Mol Microbiol 76:12–24. doi:10.1111/j.1365-2958.2009.07026.x

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Geiss-Friedlander R, Melchior F (2007) Concepts in sumoylation: a decade on. Nat Rev Mol Cell Biol 8:947–956. doi:10.1038/nrm2293

    Article  CAS  PubMed  Google Scholar 

  3. Issar N, Roux E, Mattei D, Scherf A (2008) Identification of a novel post-translational modification in Plasmodium falciparum: protein sumoylation in different cellular compartments. Cell Microbiol 10:1999–2011. doi:10.1111/j.1462-5822.2008.01183.x

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Reiter K, Mukhopadhyay D, Zhang H, Boucher LE, Kumar N, Bosch J, Matunis MJ (2013) Identification of biochemically distinct properties of the small ubiquitin-related modifier (SUMO) conjugation pathway in Plasmodium falciparum. J Biol Chem 288:27724–27736. doi:10.1074/jbc.M113.498410

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Ponder EL, Albrow VE, Leader BA, Bekes M, Mikolajczyk J, Fonovic UP, Shen A, Drag M, Xiao J, Deu E et al (2011) Functional characterization of a SUMO deconjugating protease of Plasmodium falciparum using newly identified small molecule inhibitors. Chem Biol 18:711–721. doi:10.1016/j.chembiol.2011.04.010

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Saitoh H, Hinchey J (2000) Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3. J Biol Chem 275:6252–6258

    Article  CAS  PubMed  Google Scholar 

  7. Golebiowski F, Matic I, Tatham MH, Cole C, Yin Y, Nakamura A, Cox J, Barton GJ, Mann M, Hay RT (2009) System-wide changes to SUMO modifications in response to heat shock. Sci Signal 2:ra24. doi:10.1126/scisignal.2000282

    Article  PubMed  Google Scholar 

  8. Zhou W, Ryan JJ, Zhou H (2004) Global analyses of sumoylated proteins in Saccharomyces cerevisiae. Induction of protein sumoylation by cellular stresses. J Biol Chem 279:32262–32268. doi:10.1074/jbc.M404173200

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Manza LL, Codreanu SG, Stamer SL, Smith DL, Wells KS, Roberts RL, Liebler DC (2004) Global shifts in protein sumoylation in response to electrophile and oxidative stress. Chem Res Toxicol 17:1706–1715. doi:10.1021/tx049767l

    Article  CAS  PubMed  Google Scholar 

  10. Impens F, Radoshevich L, Cossart P, Ribet D (2014) Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli. Proc Natl Acad Sci U S A 111:12432–12437. doi:10.1073/pnas.1413825111

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Cheng J, Kang X, Zhang S, Yeh ET (2007) SUMO-specific protease 1 is essential for stabilization of HIF1alpha during hypoxia. Cell 131:584–595. doi:10.1016/j.cell.2007.08.045

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Johnson ES (2004) Protein modification by SUMO. Annu Rev Biochem 73:355–382.doi:10.1146/annurev.biochem.73.011303.074118

    Article  CAS  PubMed  Google Scholar 

  13. Cooper RA (2002) SDS-PAGE and western blotting of Plasmodium falciparum proteins. Methods Mol Med 72:177–188. doi:10.1385/1-59259-271-6:177

    CAS  PubMed  Google Scholar 

Download references

Acknowledgvments

This work was supported by the National Institutes of Health (GM060980 to MJM) and the Sommer Scholar’s Program (KHR).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Michael J. Matunis .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer Science+Business Media New York

About this protocol

Cite this protocol

Reiter, K.H., Matunis, M.J. (2016). Detection of SUMOylation in Plasmodium falciparum . In: Rodriguez, M. (eds) SUMO. Methods in Molecular Biology, vol 1475. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6358-4_19

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-6358-4_19

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6356-0

  • Online ISBN: 978-1-4939-6358-4

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics