Skip to main content

Quantitative PCR for Plasma Epstein-Barr Virus Loads in Cancer Diagnostics

  • Protocol
  • First Online:
Clinical Applications of PCR

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1392))

Abstract

Epstein-Barr virus (EBV) is the causative agent of infectious mononucleosis and is associated with posttransplant lymphoproliferative disease (PTLD), Hodgkin’s lymphoma, Burkitt’s lymphoma, nasopharyngeal carcinoma, and HIV-related lymphomas. It infects nearly all humans and then persists for the life of the host in a small proportion of benign B lymphocytes. EBV reactivation, usually in the setting of immunosuppression, is the main risk factor for development of EBV-associated malignancies. EBV reactivation can be detected in tissue specimens using EBV-encoded RNA (EBER) in situ hybridization (ISH), which is routinely used for diagnosis of PTLD and nasopharyngeal carcinoma. However, EBER ISH cannot be routinely used for screening asymptomatic or monitoring posttreatment outcome due to difficulty in obtaining tissue specimens for testing and the nonquantitative nature of the assay. Recent studies have shown that EBV genomic DNA can be detected in blood of patients with EBV-associated diseases, and that monitoring of EBV viral load in blood could be an effective method of distinguishing disease-associated EBV reactivation from incidental EBV present in benign B lymphocytes, and could be used for diagnostic screening and monitoring of EBV-associated diseases. In this chapter we discuss a protocol for quantitative plasma EBV DNA analysis.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Gulley ML, Tang W (2010) Using Epstein-Barr viral load assays to diagnose, monitor, and prevent posttransplant lymphoproliferative disorder. Clin Microbiol Rev 23:350–366. doi:10.1128/cmr.00006-09

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  2. Gulley ML (2001) Molecular diagnosis of Epstein-Barr virus-related diseases. J Mol Diagn 3:1–10. doi:10.1016/s1525-1578(10)60642-3

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  3. Lo YM, Chan LY, Lo KW et al (1999) Quantitative analysis of cell-free Epstein-Barr virus DNA in plasma of patients with nasopharyngeal carcinoma. Cancer Res 59:1188–1191

    CAS  PubMed  Google Scholar 

  4. Mutirangura A, Pornthanakasem W, Theamboonlers A et al (1998) Epstein-Barr viral DNA in serum of patients with nasopharyngeal carcinoma. Clin Cancer Res 4:665–669

    CAS  PubMed  Google Scholar 

  5. Ryan JL, Fan H, Glaser SL et al (2004) Epstein-Barr virus quantitation by real-time PCR targeting multiple gene segments: a novel approach to screen for the virus in paraffin-embedded tissue and plasma. J Mol Diagn 6:378–385. doi:10.1016/s1525-1578(10)60535-1

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  6. Fan H, Robetorye RS (2013) Epstein-Barr virus (EBV) load determination using real-time quantitative polymerase chain reaction. Methods Mol Biol 999:231–243. doi:10.1007/978-1-62703-357-2_17

    Article  CAS  PubMed  Google Scholar 

  7. Yip TT, Ngan RK, Fong AH et al (2014) Application of circulating plasma/serum EBV DNA in the clinical management of nasopharyngeal carcinoma. Oral Oncol 50:527–538. doi:10.1016/j.oraloncology.2013.12.011

    Article  CAS  PubMed  Google Scholar 

  8. Laus S, Kingsley LA, Green M et al (2011) Comparison of QIAsymphony automated and QIAamp manual DNA extraction systems for measuring Epstein-Barr virus DNA load in whole blood using real-time PCR. J Mol Diagn 13:695–700. doi:10.1016/j.jmoldx.2011.07.006

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  9. Klein G, Dombos L, Gothoskar B (1972) Sensitivity of Epstein-Barr virus (EBV) producer and non-producer human lymphoblastoid cell lines to superinfection with EB-virus. Int J Cancer 10:44–57

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Sanam Loghavi .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer Science+Business Media New York

About this protocol

Cite this protocol

Loghavi, S. (2016). Quantitative PCR for Plasma Epstein-Barr Virus Loads in Cancer Diagnostics. In: Luthra, R., Singh, R., Patel, K. (eds) Clinical Applications of PCR. Methods in Molecular Biology, vol 1392. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-3360-0_6

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-3360-0_6

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-3358-7

  • Online ISBN: 978-1-4939-3360-0

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics