Abstract
The measurement of changes in the transcriptome is a common end point for various pathologic and pharmacologic studies. In recent years, with the discovery of a host of potential pharmacologic targets located directly on the nuclear membrane, the need to assess their potential control over the transcriptome has arisen. Here we present techniques for assessing changes in gene expression in isolated nuclei in response to stimulation by endogenous GPCRs on the nuclear membrane.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Bywater MJ, Pearson RB, McArthur GA et al (2013) Dysregulation of the basal RNA polymerase transcription apparatus in cancer. Nat Rev Cancer 13:299–314
Tadevosyan A, Vaniotis G, Allen BG et al (2012) G protein-coupled receptor signalling in the cardiac nuclear membrane: evidence and possible roles in physiological and pathophysiological function. J Physiol 590:1313–1330
Zhu T, Gobeil F, Vazquez-Tello A et al (2006) Intracrine signaling through lipid mediators and their cognate nuclear G-protein-coupled receptors: a paradigm based on PGE2, PAF, and LPA1 receptors. Can J Physiol Pharmacol 84:377–391
Loewe RP (2013) Combinational usage of next generation sequencing and qPCR for the analysis of tumor samples. Methods 59:126–131
Huang Q, Lin B, Liu H et al (2011) RNA-Seq analyses generate comprehensive transcriptomic landscape and reveal complex transcript patterns in hepatocellular carcinoma. PLoS One 6:e26168
Vaniotis G, Del Duca D, Trieu P et al (2011) Nuclear β-adrenergic receptors modulate gene expression in adult rat heart. Cell Signal 23:89–98
Acknowledgements
This work was supported by grants from the Canadian Institutes of Health Research (MOP-64183 and MOP-125970 to BGA and MOP-79354 and MOP-119530 to TEH) and the Fondation des Maladies du Coeur du Québec (to BA).
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer Science+Business Media New York
About this protocol
Cite this protocol
Vaniotis, G., Gora, S., Nantel, A., Hébert, T.E., Allen, B.G. (2015). Examining the Effects of Nuclear GPCRs on Gene Expression Using Isolated Nuclei. In: Allen, B., Hébert, T. (eds) Nuclear G-Protein Coupled Receptors. Methods in Molecular Biology, vol 1234. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-1755-6_15
Download citation
DOI: https://doi.org/10.1007/978-1-4939-1755-6_15
Published:
Publisher Name: Humana Press, New York, NY
Print ISBN: 978-1-4939-1754-9
Online ISBN: 978-1-4939-1755-6
eBook Packages: Springer Protocols