Abstract
Hypoxia and its signalling pathway play a key role in human physiology and a variety of diseases. Alterations in histone methylation coordinate transcriptional responses to hypoxia. Here, we detail a fixed cell immunofluorescence method for quantifying hypoxia-induced changes in histone methylation, exemplified by the measurement of H3K27me3.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Hammarlund EU, Flashman E, Mohlin S, Licausi F (2020) Oxygen-sensing mechanisms across eukaryotic kingdoms and their roles in complex multicellularity. Science 370:eaba3512
Giaccia AJ, Simon MC, Johnson R (2004) The biology of hypoxia: the role of oxygen sensing in development, normal function, and disease. Genes Dev 18:2183–2194
Batie M, Kenneth NS, Rocha S (2022) Systems approaches to understand oxygen sensing: how multi-omics has driven advances in understanding oxygen-based signalling. Biochem J 479:245–257
Gallipoli P, Huntly BJP (2019) Histone modifiers are oxygen sensors. Science 363:1148–1149
Frost J, Frost M, Batie M, Jiang H, Rocha S (2021) Roles of HIF and 2-Oxoglutarate-dependent dioxygenases in controlling gene expression in hypoxia. Cancers (Basel) 13:350
Allan C, Burel JM, Moore J, Blackburn C, Linkert M, Loynton S, Macdonald D, Moore WJ, Neves C, Patterson A, Porter M, Tarkowska A, Loranger B, Avondo J, Lagerstedt I, Lianas L, Leo S, Hands K, Hay RT, Patwardhan A, Best C, Kleywegt GJ, Zanetti G, Swedlow JR (2012) OMERO: flexible, model-driven data management for experimental biology. Nat Methods 9:245–253
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2023 The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature
About this protocol
Cite this protocol
Shakir, D., Batie, M., Rocha, S. (2023). Fixed Cell Immunofluorescence for Quantification of Hypoxia-Induced Changes in Histone Methylation. In: Papa, S., Bubici, C. (eds) Metabolic Reprogramming. Methods in Molecular Biology, vol 2675. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3247-5_19
Download citation
DOI: https://doi.org/10.1007/978-1-0716-3247-5_19
Published:
Publisher Name: Humana, New York, NY
Print ISBN: 978-1-0716-3246-8
Online ISBN: 978-1-0716-3247-5
eBook Packages: Springer Protocols