Abstract
In situ hybridization (ISH) allows evaluation of genetic abnormalities, such as changes in chromosome number, chromosome translocations, or gene amplifications, by hybridization of tagged DNA (or RNA) probes with complementary DNA (or RNA) sequences in interphase nuclei of target tissue. However, chromogenic in situ hybridization (CISH) is also applicable to formalin-fixed, paraffin-embedded (FFPE ) tissues, besides metaphase chromosome spreads. CISH is similar to fluorescent in situ hybridization (FISH) regarding pretreatments and hybridization protocols but differs in the way of visualization. Indeed, CISH signal detection is similar to that used in immunohistochemistry, making use of a peroxidase-based chromogenic reaction instead of fluorescent dyes. In particular, tagged DNA probes are indirectly detected using an enzyme-conjugated antibody targeting the tags. The enzymatic reaction of the chromogenic substrate leads to the formation of strong permanent brown signals that can be visualized by bright-field microscopy at 40× magnification. The advantage of CISH is that it allows the simultaneous observation of gene amplification and tissue morphology, and the slides can be stored for a long time.
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References
Evan GI, Littlewood TD (1993) The role of c-myc in cell growth. Curr Opin Genet Dev 3:44–49. https://doi.org/10.1016/S0959-437X(05)80339-9
Ciriello G, Miller ML, Aksoy BA, Senbabaoglu Y, Schultz N, Sander C (2013) Emerging landscape of oncogenic signatures across human cancers. Nat Genet 45:1127–1133. https://doi.org/10.1038/ng.2762
Zhang Y, Xu H, Frishman D (2016) Genomic determinants of somatic copy number alterations across human cancers. Hum Mol Genet 25:1019–1030. https://doi.org/10.1093/hmg/ddv623
Deming SL, Nass SJ, Dickson RB, Trock BJ (2000) C-myc amplification in breast cancer: a meta-analysis of its occurrence and prognostic relevance. Br J Cancer 83:1688–1695
Masramon L, Arribas R, Tartola S, Perucho M, Peinado MA (1998) Moderate amplifications of the c-myc gene correlate with molecular and clinicopathological parameters in colorectal cancer. Br J Cancer 77:2349–2356
Augenlicht LH, Wadler S, Corner G, Richards C, Ryan L, Multani AS et al (1997) Low-level c-myc amplification in human colonic carcinoma cell lines and tumors: a frequent, p53-independent mutation associated with improved outcome in a randomized multi-institutional trial. Cancer Res 57:1769
Baker VV, Borst MP, Dixon D, Hatch KD, Shingleton HM, Miller D (1990) C-myc amplification in ovarian cancer. Gynecol Oncol 38:340–342
Mitani S, Kamata H, Fujiwara M, Aoki N, Tango T, Fukuchi K, Oka T (2001) Analysis of c-myc DNA amplification in non-small cell lung carcinoma in comparison with small cell lung carcinoma using polymerase chain reaction. Clin Exp Med 1:105–111
Rodriguez-Pinilla MS, Jones RL, Lambros MBK, Arriola E, Savage K, James M et al (2007) MYC amplification in breast cancer: a chromogenic in situ hybridisation study. Clin Pathol 60:1017–1023
Todorović-Raković N, Nešković-Konstantinović Z, Nikolić-Vukosavljević D (2011) C-myc as a predictive marker for chemotherapy in metastatic breast cancer. Clin Exp Med 12(4):217–223. https://doi.org/10.1007/s10238-011-0169-y
Hsi B-L, Xiao S, Fletcher JA (2003) Chromogenic in situ hybridization and FISH in pathology. Methods Mol Biol 204:343–351
Madrid MA, Lo RW (2004) Chromogenic in situ hybridization (CISH): a novel alternative in screening archival breast cancer tissue samples for HER-2/neu status. Breast Cancer Res 6:R593–R600
Rummukainen JK, Salminen T, Lundin J et al (2001) Amplification of c-myc oncogene by chromogenic and fluorescence in situ hybridization in archival breast cancer tissue array samples. Lab Investig 811:545–1551
Atabati H, Raoofi A, Amini A, Farahani RM (2018) Evaluating HER2 gene amplification using chromogenic in situ hybridization (CISH) method in comparison to immunohistochemistry method in breast carcinoma. Open Access Maced J Med Sci 6:1977–1981. https://doi.org/10.3889/oamjms.2018.455. eCollection 2018
Ali AHM, Yahya AQ, Mohammed HL (2019) Chromogenic in situ hybridization technique versus immunohistochemistry in assessment of HER2/neu status in 448 Iraqi patients with invasive breast carcinoma. Open Access Maced J Med Sci 7:1917–1925. https://doi.org/10.3889/oamjms.2019.342. eCollection 2019
Sarli A, Mozdarani H, Rakhshani N, Mozdarani S (2019) Relationship study of the verified human epidermal growth factor receptor 2 amplification with other tumor markers and clinicohistopathological characteristics in patients with invasive breast cancer, using chromogenic in situ hybridization. Cell J 21:322–330. https://doi.org/10.22074/cellj.2019.6219
Khaleghian M, Shakoori A, Razavi AE, Azimi C (2015) Relationship of amplification and expression of the C-MYC gene with survival among gastric cancer patients. Asian Pac J Cancer Prev 16:7061–7069
Khaleghian M, Jahanzad I, Shakoori A, Emami Razavi A, Azimi C (2016) Association between amplification and expression of C-MYC gene and clinicopathological characteristics of stomach cancer. Iran Red Crescent Med J 18:e21221. https://doi.org/10.5812/ircmj.21221. eCollection 2016 Feb
Khaleghian M, Jahanzad I, Shakoori A, Ardalan FA, Azimi C (2015) Study of C-MYC amplification and expression in Iranian gastric cancer samples using CISH and IHC methods. Adv Biomed Res 4:116. https://doi.org/10.4103/2277-9175.157841. eCollection 2015
Nitta H, Kelly B (2019) Chromogenic tissue-based methods for detection of gene amplifications (or rearrangements) combined with protein overexpression in clinical samples. Methods Mol Biol 1953:301–314. https://doi.org/10.1007/978-1-4939-9145-7_19
Monteiro RL, Damaceno DS, Kimura LM, Cirqueira CS, Guerra JM, Araújo LJT (2019) Validation of chromogenic in situ hybridization reactions for DNA and RNA detection in formalin-fixed paraffin-embedded tissue. J Bras Patol Med Lab 55. https://doi.org/10.5935/1676-2444.20190008
Li X, Chew S, Chay W et al (2013) Optimizing Ventana chromogenic dual in-situ hybridization for mucinous epithelial ovarian cancer. BMC Res Notes 6:562. https://doi.org/10.1186/1756-0500-6-562
Nakamura N, Fujii T, Soejima Y, Sawabe M (2019) Optimization of trypsin treatment condition utilizing immunohistochemistry for chromogenic in situ hybridization. Pathol Int. https://doi.org/10.1111/pin.12855
Leong S-Y, Haffajee Z (2011) Microwaves for chromogenic in situ hybridization. Methods Mol Biol 724:79–89. https://doi.org/10.1007/978-1-61779-055-3_5
Acknowledgments
This work was supported by the research Grant No. 175068 from the Fund for basic science of the Ministry of Education and Science of the Republic of Serbia.
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Todorović-Raković, N. (2021). Chromogenic In Situ Hybridization (CISH) as a Method for Detection of C-Myc Amplification in Formalin-Fixed Paraffin-Embedded Tumor Tissue: An Update. In: Soucek, L., Whitfield, J. (eds) The Myc Gene. Methods in Molecular Biology, vol 2318. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1476-1_17
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