Abstract
Heteroduplex oligonucleotides (HDOs) were a novel type of nucleic acid drugs based on an antisense oligonucleotide (ASO) strand and its complementary RNA (cRNA ) strand. HDOs were originally designed to improve the properties of RNase H-dependent ASOs and we reported in our first paper that HDOs conjugated with an α-tocopherol ligand (Toc-HDO ) based on a gapmer ASO showed 20 times higher silencing effect to liver apolipoprotein B (apoB) mRNA in vivo than the parent ASO. Thereafter the HDO strategy was found to be also effective for improving the properties of ASOs modulating blood–brain barrier function and ASO antimiRs which are RNase H-independent ASOs. Therefore, the HDO strategy has been shown to be versatile technology platform to develop effective nucleic acid drugs.
Key words
- Nucleic acid drug
- Heteroduplex oligonucleotide (HDO)
- Antisense oligonucleotide (ASO)
- Drug delivery system (DDS)
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Kurreck J (2003) Antisense technologies. Eur J Biochem 270:1628–1644
Seth PP, Swayze EE (2019) The Medicinal Chemistry of RNase H-activating Antisense Oligonucleotides In: Agrawal S, Gait MJ (eds) Advances in nucleic acid therapeutics. RSC publishing, United Kingdom
Wada S, Yasuhara H, Wada F et al (2016) Evaluation of the effects of chemically different linkers on hepatic accumulations, cell tropism and gene silencing ability of cholesterol-conjugated antisense oligonucleotides. J Control Release 226:57–65
Godard G, Boutorine AS, Saison-Behmoaras E, Hélène C (1995) Antisense effects of cholesterol-Oligodeoxynucleotide conjugates associated with poly(alkylcyanoacrylate) nanoparticles. Eur J Biochem 232:404–410
Soutschek J, Akinc A, Bramlage B et al (2004) Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs. Nature 432:173
Lorenz C, Hadwiger P, John M et al (2004) Steroid and lipid conjugates of siRNAs to enhance cellular uptake and gene silencing in liver cells. Bioorg Med Chem Lett 14:4975–4977
Nishina T, Numata J, Nishina K et al (2015) Chimeric antisense oligonucleotide conjugated to α-Tocopherol. Mol Ther Nucleic Acids 4:e220
Nishina K, Unno T, Uno Y et al (2008) Efficient in vivo delivery of siRNA to the liver by conjugation of α-Tocopherol. Mol Ther 16:734–740
Nair JK, Willoughby JL, Chan A et al (2014) Multivalent N-Acetylgalactosamine-conjugated siRNA localizes in hepatocytes and elicits robust RNAi-mediated gene silencing. J Am Chem Soc 136:16958–16961
Prakash TP, Graham MJ, Yu J et al (2014) Targeted delivery of antisense oligonucleotides to hepatocytes using triantennary N-acetyl galactosamine improves potency 10-fold in mice. Nucleic Acids Res 42:8796–8807
Yu RZ, Graham MJ, Post N et al (2016) Disposition and pharmacology of a GalNAc3-conjugated ASO targeting human lipoprotein (a) in mice. Mol Ther Nucleic Acids 5:e317
Nishina K, Piao W, Yoshida-Tanaka K et al (2015) DNA/RNA heteroduplex oligonucleotide for highly efficient gene silencing. Nat Commun 6:7969
Kuwahara H, Song J, Shimoura T et al (2018) Modulation of blood-brain barrier function by a heteroduplex oligonucleotide in vivo. Sci Rep 8:4377
Hogan DJ, Vincent TM, Fish S et al (2014) Anti-miRs competitively inhibit microRNAs in Argonaute complexes. PLoS One 9:e100951
Li Z, Rana TM (2014) Therapeutic targeting of microRNAs: current status and future challenges. Nat Rev Drug Discov 13:622–638
Yoshioka K, Kunieda T, Asami Y et al (2019) Highly efficient silencing of microRNA by heteroduplex oligonucleotides. Nucleic Acids Res 47(14):7321–7332. https://doi.org/10.1093/nar/gkz492
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Hara, R.I., Yoshioka, K., Yokota, T. (2020). DNA–RNA Heteroduplex Oligonucleotide for Highly Efficient Gene Silencing. In: Yokota, T., Maruyama, R. (eds) Gapmers. Methods in Molecular Biology, vol 2176. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0771-8_8
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DOI: https://doi.org/10.1007/978-1-0716-0771-8_8
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